| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0680 |
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| Symbol | |
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| ID | 6205479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 835393 |
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| End bp | 836649 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641690303 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001817569 |
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| Protein GI | 182412503 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.736075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCTG TCCTCATCGT CGACGACCTC CTCTCGATTC ACGAGATGCT GGAGGCGGTT
ATCCAGCCCA CGGGCTTCAG CACCGCGTTC GCGACCGATG GAGAAAAAGC GCTCGCACGC
TACAAGGCGG AGAAGTTCGA CCTGGTGCTG GCCGACATCG ACATGAAGCC GATGGACGGC
ATCACGCTGC TGAAGCAGCT GAAGCTCTAC GAGCCGACGG CGATCGTCAT CATCATGACC
GCCTACGCCA GCACCGAAAG CGCGGTGCAG GCGTTGAAAT TTGGCGCCTT CGACTACCTG
CAAAAACCGT TCCGCGTTGA CGAGCTGATC GCGACGCTGC GTCGCGGGAT CGAGTTCAAG
CAGTTCCAGT CGGAGCGCGC GCTGGCTGGC GCCGCGTCGG GCGTGAAGGC CGGCGACATC
GAGGCGCGGC TTATCGGCCA GAGTGCGAGC ATGCGCAAGC TGGTTCAGCA GGTCAAAAAG
CTCGCGGCGG TGCGCACGCC GGTGCTGTTG ATCGGCGAGA ATGGCTCGGG CAAGAGCGCG
GTCGCAGAGA TATTGCACGC CGCCACCGGG GCTCCGGAAA ACCAACTGTT GCGGATCGAT
TGTTCGCTCA GTTCGGAAGC GAGCTTCCGC GACGGTCTGC TCGGCCAGAA CGGCGAAGGC
GGCACGTGGG TGCAGCAGGC CAAAGGCGGC ACGTTGCTGC TGCAGCATCT GCAGTGTCTG
GCGCCGGCGG TGCAGAAGGA ATTGGTGAGC GTGTTGCGCA ACACCGCGCA CGGCTTCCGG
CTGATCTGCA CGACGACCGA GGACCTCGAG GCGTTGACGG ACGAGGGCAA GTTCAACGAC
GAGCTGTTTT ATCGGGTCGC GTCGCTCCCC GTGCATCTGC CGGCGCTGCG CGACCGCGTC
GAAGACCTGC CGCTGCTGGT GAAGAGCTAC GTCGCGAAGG CCGCGAACCC GCACTTCGAC
GCGAGCTTGG TCGAATTTAC CGACGATGCG ATGGCGGTGC TCTACGCTTA CCACTGGCCC
GGCAATTTGA CGGAGCTCTA CCAAGTCGTC TCGAAAATCG CGGCGACGAC GGAGACCCGC
ATCGTGACCT CGCAGCAGTT ACCGTTGCGA TTGCGCGAAC TCAAGAGCTG GCCCTCACTC
GAGGAGTATC TGGGCGGTCA GGAAAAGCAG TATCGGGAGA TGGTCCTGCA CGCCTGTCGG
GGGGACAAAG CCGCCGCGGC GAAAGTCCTC GGCATCGACG TCGCGTCCTT CGTGTAG
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| Protein sequence | MPSVLIVDDL LSIHEMLEAV IQPTGFSTAF ATDGEKALAR YKAEKFDLVL ADIDMKPMDG
ITLLKQLKLY EPTAIVIIMT AYASTESAVQ ALKFGAFDYL QKPFRVDELI ATLRRGIEFK
QFQSERALAG AASGVKAGDI EARLIGQSAS MRKLVQQVKK LAAVRTPVLL IGENGSGKSA
VAEILHAATG APENQLLRID CSLSSEASFR DGLLGQNGEG GTWVQQAKGG TLLLQHLQCL
APAVQKELVS VLRNTAHGFR LICTTTEDLE ALTDEGKFND ELFYRVASLP VHLPALRDRV
EDLPLLVKSY VAKAANPHFD ASLVEFTDDA MAVLYAYHWP GNLTELYQVV SKIAATTETR
IVTSQQLPLR LRELKSWPSL EEYLGGQEKQ YREMVLHACR GDKAAAAKVL GIDVASFV
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