| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0644 |
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| Symbol | |
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| ID | 6206418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 786053 |
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| End bp | 789382 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641690267 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001817534 |
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| Protein GI | 182412468 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCG TCGGACACGT GATGATTCTG GCGTCGGCGG GCTCAGGCAA AACCTACGCT
CTGACCAACC GTTTTGTGCG GCTGCTCGCG CTCGGCGCGG CGCCGGAGCG GATCGTGGCG
CTGACGTTTA CGCGAAAGGC AGCCGGCGAG TTCTTCGACG AGATCCTGAA CAAGCTGGCG
CGCGCGGCCA GCGATGCGGC GTATGCGCGC CAACTGGCGG CCGAGATCGG CCGTCCGGCA
GCGATGGGGA CGGCGGAATT CCTCGCACTG CTACGGCGAA TGGTGGACGC GATGCACCGG
CTCCGGCTCG GCACGATCGA CGGATTCTTC GCGCGGATCG CCCGCAATTT CCCGTTGGAA
CTCGGGCTTG CGGGCGAGTT CGAACTGCTC GAGGAGCACG CAGCGCGGAT GGAGCGGAGC
CGCGTGCTGC GGCAGTTGTT TGAGCGGCCG ACCGACGGAC TGGCGGACGC GCAGCGGGAG
TTCATCGAAG CGTTCAAACG CGCGACCTTC GGCGTCGAGG AGAAGCGGCT CGGCGCGCAG
TTGGATGCGT TTCTCGACGA GCATCAGGAA ATTTTTCTGA ACGCGTCCGC GCGCGACGCC
TGGGGTGACG CGCGCCGGAT TTGGCGCAAC GGCAGTCGCT GGCTCGGGCC GCCATGTGAC
GTCGCGGCGG CAGTGCAGAC GCTGCGCGCG TGGGTGGATG CCGCCGGTGT CGGCGAGAAG
CAGCGCCAGC GCTGGATGGA GTTCTTCGAC GCCTGTGTGG CGTGGGCGCC GGGCATCGCG
CCGGTCCGGC CGCTGGTTTA TGTGCTCGAA AAGGTGCTGG CGGCCTGGAG CGACCTCGAG
GCGGGTCGGG CCGTGCTCGA ATTCGATCGC AAGCCGCAGG AGCTGAGCGC GGCGGCGTGC
GCGGCGCTCG CGGCGCTCGC GCGGCACGTG GTCGGCGGGG AGCTGACGCG GCGGCTCGAG
ATGACGAGCG GGATTTACGC GGTGCTGGCG GGCTATGAAG CGATGTATCA TGACGCGGTC
CGTCGCGCCG GCAAACTGAC GTTTGCCGAT GTGCAGCGAC TGCTGATGCC GGGAAACGGG
GCGCCGCTGC TGAGCGGCCG CGAAGCCCCG GGCGCGGTCC CGGACGACGA TGCGGACTCG
CAACTCGCGC TGCCATCGAT GGAGCTCGGC GAAGCGGCGG CTTTGAGTGG TGCGGAGGAA
CGCCGGCTGC TGATCGATTA TCGGTTGGAC GGCGAAATCG ATCACTGGCT GCTCGACGAG
TTTCAGGACA CCAGCTTCGG CCAATGGTCG GTGTTGCGAA ACCTGATTGA CGAGGCGGTC
CAGGATTCCA GCGGCGCGCG GAGCTTTTTC TACGTGGGCG ACGTGAAGCA GGCGATCTTC
GCCTGGCGCG AGGGCGATCC GCGGCTCTTC CGCGAGATTT TTGATCACTA CAACGCGATG
CGGCCCGGCA CGATCGCTGA GGAGCATCTC GTCAAATCGT GGCGCTCGGG TCCGGCAGTG
ATCGCGAGCG TCAACCGAGT ATTCGGCGCG GCGGCGGAGT TGACCGAGCT GTTCGCGTGT
CCGGCGACGC AGACCTGGAA TCGCGAGTGG CGCGCGCACG AAACGGCGCG GCCGCAGCTC
GCCGGCCACG TGGCGCTGCT GCACGCCGGC GGTCCGAGGG ATACTGCGGG CATTTCCGAA
GAGGCACGGT TCGCCCTGAC GCTGGCGCTC TTGGAGGAGA TTCAGCCGCT CGCGCGCGGC
CTGAGCTGTG CGGTGCTGGT GCAGAAGAAC AGTACCGCGA CGGCGCTCGC GGACAGGCTG
CGTCGGGCCG GCGGCATCGC CGCCGTGGCC GAGTCGGATC TCCACGTGTG CACCGATAAT
CCGGTGGGCA CCGCCCTGCT CGCGTTGGCG AAGGCGGCGG CGCATCCGGG CGACACGCGG
GCGTGGGAGC ACGTGCAGAT GAGCCCGCTG GCGAGCGTGC TGCACGCTCA GCACGTGCGC
ACGCCCGAGC AGCTGACTCG CCGGCTGCTG ACGGAAATCC ATCGAGATGG ATTCGAACGC
ACGTTCGGTG AGTGGGCGCG CCGGCTCGAG CCGCGACTCG CGTCGGACGA TGCATTCAGT
CGCGAACGCC TCCGGCAATT TGCCGCAGCA GCGGGGCTGT TCGATGCGAC CGGCAGCCGG
GACGTTGCGG AGTTCATCGC GTTCATGGAA CGACACGTCG TCCGCGAAGT GGAGAGCGCG
GACGTGGTGC GCGTGATGAC CATTCACAAA GCGAAAGGCC TGGGCTTCGA CGTCGTAATC
CTGCCAGACC TCGAAGGCCA GAAGCTCGAC TCGCGTCGCG ATGGACTCGC GGTGCAGCGC
GGGCCCGACC GCCAAGTGGA ATGGGTGCTG GATCTGCCGG GTAAACTCAT CCACGACTGC
GACACGATTT TGGCGGAGCA CGTGCGGGCG GCCGAGGCCG ATGCATGCTA CGAAGCGTTG
TCGCTGTTGT ACGTCGCGAT GACGCGAGCC AAACGCGCCA TGTATCTGGT CGTGAAGCCG
CCGGGCGCCT CGAGTTCGCG CAACTACCCA CGGCTGCTCG CGAGGACGCT CGGCGAAGAA
ACGATCCCTG TGCGGGTCGG CGCACGGGAA TTTGCGGGGG CGTTTAGTGA GGGCGATCCT
CGCTGGCACC TTGATCTTCA GCCGGCGATT GCCGCGGACG CGGCCACGTC CGTCGTTCGC
CAGCGGATCG AACCGTTGCG GTCGGCGGCG GCGAAGTCTC CCCGGCGGCT CGTTGCCCGC
CGGCCCTCGT CCGTGCAAGG GACGCAGTGG ATGGGCGCGC AGCTATTTTC TGCGGCACGG
ACGGACCGGA CCGAGTTCGG CACCGCGGTG CACCGTTTGC TGGCTGAGGT GGAGTGGGGC
ACCCCGGCCA CGGCGCAGTC GATGACGACG GAGTGGCGGG CGCGCGGCGA GGATGCAGCG
GTGGTTGCGG AGGCGGCGGG TTGCCTGGAA TCACCGGCGC TCGCGCACGT CTGGCGTTCT
GCAGCCAACG CGGAGGTCTG GCGCGAGCGG GCCTTCGAGA TCGTGCTCGA GGACGTATGG
GTCTCCGGAA TATTCGATCG CGTGATCGTC TGGCGCGATG CCGCGGGCCG TCCCATCCGG
GCGAGCGTGT TCGACTTCAA GACCGATCGC GTGGGCGAAT CGCCGCAGTG GGACGAACTC
GCGCGCCGCC ATGCAGGGCA GCTGAATCTC TATCGGCGGG TGGCGACTGT GCTCACCGGA
CTGCCGGCCA TGGCGATCAC AAGCGAGGCC GTCTTCACCC GGGCCCGGAG AGCGGTCGCG
GTAACCGACG CGACCCCGAC ACAGGACTAG
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| Protein sequence | MTRVGHVMIL ASAGSGKTYA LTNRFVRLLA LGAAPERIVA LTFTRKAAGE FFDEILNKLA
RAASDAAYAR QLAAEIGRPA AMGTAEFLAL LRRMVDAMHR LRLGTIDGFF ARIARNFPLE
LGLAGEFELL EEHAARMERS RVLRQLFERP TDGLADAQRE FIEAFKRATF GVEEKRLGAQ
LDAFLDEHQE IFLNASARDA WGDARRIWRN GSRWLGPPCD VAAAVQTLRA WVDAAGVGEK
QRQRWMEFFD ACVAWAPGIA PVRPLVYVLE KVLAAWSDLE AGRAVLEFDR KPQELSAAAC
AALAALARHV VGGELTRRLE MTSGIYAVLA GYEAMYHDAV RRAGKLTFAD VQRLLMPGNG
APLLSGREAP GAVPDDDADS QLALPSMELG EAAALSGAEE RRLLIDYRLD GEIDHWLLDE
FQDTSFGQWS VLRNLIDEAV QDSSGARSFF YVGDVKQAIF AWREGDPRLF REIFDHYNAM
RPGTIAEEHL VKSWRSGPAV IASVNRVFGA AAELTELFAC PATQTWNREW RAHETARPQL
AGHVALLHAG GPRDTAGISE EARFALTLAL LEEIQPLARG LSCAVLVQKN STATALADRL
RRAGGIAAVA ESDLHVCTDN PVGTALLALA KAAAHPGDTR AWEHVQMSPL ASVLHAQHVR
TPEQLTRRLL TEIHRDGFER TFGEWARRLE PRLASDDAFS RERLRQFAAA AGLFDATGSR
DVAEFIAFME RHVVREVESA DVVRVMTIHK AKGLGFDVVI LPDLEGQKLD SRRDGLAVQR
GPDRQVEWVL DLPGKLIHDC DTILAEHVRA AEADACYEAL SLLYVAMTRA KRAMYLVVKP
PGASSSRNYP RLLARTLGEE TIPVRVGARE FAGAFSEGDP RWHLDLQPAI AADAATSVVR
QRIEPLRSAA AKSPRRLVAR RPSSVQGTQW MGAQLFSAAR TDRTEFGTAV HRLLAEVEWG
TPATAQSMTT EWRARGEDAA VVAEAAGCLE SPALAHVWRS AANAEVWRER AFEIVLEDVW
VSGIFDRVIV WRDAAGRPIR ASVFDFKTDR VGESPQWDEL ARRHAGQLNL YRRVATVLTG
LPAMAITSEA VFTRARRAVA VTDATPTQD
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