| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0623 |
|---|
| Symbol | |
|---|
| ID | 6207660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 762605 |
|---|
| End bp | 763186 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641690246 |
|---|
| Product | membrane-flanked domain-containing protein |
|---|
| Protein accession | YP_001817513 |
|---|
| Protein GI | 182412447 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3428] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.959285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACCCCG CGTCCGACGC TGCCGCGATT CTTTCGATCG AGCGGCCCCA CCCGTCGCTG
CTCACTTACT ACCTGCTCGC GGCTGCGGTG ATTCCGCCGC TGTTTCCGAT CGTCGCCCTG
CCGCTTTATT TCCGATACCA CACGATGCGC TACCGGTTCA CCGAGGAGGG CATCTCGATG
AGGTGGGGCA TCCTGTTTCG CCGCGAGGTC ATCATCCACT ACGCGCGGAT TCAGGACATC
CACCTGCGCT CGAACCTGGT TGAACGCTGG CTCGGCTTGG CGCGCGTCCT CGTGCAGACC
GCCAGCGGCA ACGCCGCCGC CGAGATGACC TTGGAAGGAT TGCGGGAGTT CGAAGCTGTC
CGTGATTTTC TCTATTCGCG GATGCGGGGC GTGAAGGAAC ACGCGCTCCC CAGCCACGGG
CCGAGCGCGG CGGCCGCAAC GGGAACCGCG ATTCCGGCCG GAACGGAACC GGCGCTCGCC
GCCACGCTGC GCGAAATCGC CGCCGAACTT CGCGCGATGC GCACGGCGCT GGCGGCGCGC
GAGACGCGCG AGGCCCCGTC CGACGGCCAT CACCATGCTT GA
|
|---|
| Protein sequence | MHPASDAAAI LSIERPHPSL LTYYLLAAAV IPPLFPIVAL PLYFRYHTMR YRFTEEGISM
RWGILFRREV IIHYARIQDI HLRSNLVERW LGLARVLVQT ASGNAAAEMT LEGLREFEAV
RDFLYSRMRG VKEHALPSHG PSAAAATGTA IPAGTEPALA ATLREIAAEL RAMRTALAAR
ETREAPSDGH HHA
|
|---|
| |