| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0618 |
|---|
| Symbol | |
|---|
| ID | 6206447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 755769 |
|---|
| End bp | 757901 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641690241 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001817508 |
|---|
| Protein GI | 182412442 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGCC GCTTCGCGCT GGCGCCCGGG GCGATTTCTG GCACGTTGAG CGCCTTCCTT
ATGTTCCGCT CCTCCCTCGC GTTTCTCGCC GTTTTCTCCT GCGCCACGAT TTCCGCGCAT
GCCGATGAGG GCATGTGGCT CTACTCCGCG CCACCGCGCG AACAGATCAA GGCCACCTAT
GGTTTCGAAC TGACCGACGC CTGGCTCGAA CACCTCATGA AAGCCTCCGT CCGCTTCAAC
AGCGGCGGCT CGGGCTCGTT CGTCAGCGGC GACGGTCTCG TCATCACCAA CCATCACGTC
GGCGCCGATT CGCTCCAGAA AATGGGCACG GCGGAAAAGA ACTACTTGCG TGACGGGTTC
TACGCGCAGA CGCCCGCCGA CGAGGTCAAA TGCAACGACC TCGAGCTGAA CGTGCTTCAG
TCCATCGAGG ATGTCACCGC GCGCGTCAAC GCCGCGATCC CCGTCGGCGC CACCGGCGAG
GCCGCTGCGC TCGCGCGGCG CAAGATCACC GCCGAGATCG AGAAGGAATC ACGCGAGAAA
ACCGGGCTGC GCAGCGACGT CGTCACACTC TACCAGGGTG GGCAGTATCA CCTCTACCGG
TTCAAGCGCT ACACGGATAT CCGGCTCGTG TTTGCGCCGG AGATGCAGGC GGCGTTCTAC
GGTGGCGATC CCGACAATTT CGAGTATCCC CGCTACTGCC TCGATGTCTG CCTGTTCCGC
GTCTACGAGA ATGGCCAGCC GGTGAAGCCC GAGCATTATC TGAAGTGGTC GGAACGCGGC
GCGCAGGATG GCGAACTGAC TTTCGTCTCC GGACATCCCG GCCGCACGAG CCGGCTGCTC
ACGACTCCCG AGCTCGAGTA TCTGCGCGAT GTGAGTTTCC CCGCCACGCT CGATCTGTTG
AAGCGCCGTG AAGTGCTGCT CACGGCGTGG AGCGGTCGCA GCCAGGAAAA CGCGCGCCGC
GCGCGTGACG ACCTGTTCTC GCTCCAGAAC TCGCGCAAGG TGCGCGACGG CGGCCAGGCC
GCGCTGCAGG ACCCGACCTT CATGGGCGAA AAGATCGCCA AGGAAAAATC CTTCAAACAC
CAGCTGGCCG ACCAACCGGA AGGCAAGGAA GCGCTGGCGG CGTTCGATCG AATCGCTGAC
GCGCAAAAGG CGATTCGCGC GGTCGCCCAA CGCTACCGGC TGCTCGAAAG CGGCCTCGGG
TTGAATGCGG AGTCGTTCCG GATCGCGCGC GAACTGCTGC GCGCCGGCGA CGAACACCCG
AAGCCGAACG GCGAACGGCT GAAGGAGTTT ACCGATGCGC GCCGCGAATC CTTCGAACTC
GAGCTGTTCT CCGACAAACC GATCTACGCA GACTACGAAA TCCTTACGCT CGCCGATTCG
CTGACCGATC TCGTCGAGCA ACTCGGCTAC CACGATCCGC TCGTGCAGCG CGTCCTCGCT
GGCAAATCGC CGCGCGCCCG CGCCGCCGAG CTGATCAACG ACACCCAGGT ACGCGACGTC
GCCTTCCGCA AGCAGCTCTA CGAGGGCGGC GCGACGGCGG TCACCGCGGC CAAGGATCCG
ATGATCGAAC TCGCGCGGCT CGTTGATCCC GAGGCGCGCA CGTTGCGCAA GACCGTCGAG
GCGCAGGATG AGATCAAACA GCAGGCGCAG GCCGCCATCG GCAGAGCGCG TTTCGCGGTC
GAGGGCACCG CCAACTATCC GGACGCCACG TTCACGCTGC GACTCAGCTA CGGCGCCGTG
AAAGGCTATG AGGAAAACGG CCAGCACGTG CCGGCAATGA CCAACTTTGC CGGACTCTAC
GCGCGCAGCG CAGAGCAAAA CAACCAGCCG CCCTTCGACC TGCCGCCACG CTGGGTGGCG
CGCAAGGCGG CCCTCGATCT CACCACGCCG TTCAACTTCG TCAGCACCGC GGACATCATC
GGCGGCAACT CCGGCAGCCC CGTGGTCAAC CGTGCGGGCG AGTTCGTCGG CATCATTTTC
GACGGCAACA TCTACTCACT CGTCGCGGAC TTCGGTTACG AGGACAAGCT CTCGCGCGCG
TTGAGCGTGC ACAGCGCCGG CATCCTCGAA GCGCTGCGCA AAATCTACGA AGTCCCCGCC
CTCGCAGACG AATTGGTGAA GGGCCACCGC TGA
|
|---|
| Protein sequence | MAGRFALAPG AISGTLSAFL MFRSSLAFLA VFSCATISAH ADEGMWLYSA PPREQIKATY
GFELTDAWLE HLMKASVRFN SGGSGSFVSG DGLVITNHHV GADSLQKMGT AEKNYLRDGF
YAQTPADEVK CNDLELNVLQ SIEDVTARVN AAIPVGATGE AAALARRKIT AEIEKESREK
TGLRSDVVTL YQGGQYHLYR FKRYTDIRLV FAPEMQAAFY GGDPDNFEYP RYCLDVCLFR
VYENGQPVKP EHYLKWSERG AQDGELTFVS GHPGRTSRLL TTPELEYLRD VSFPATLDLL
KRREVLLTAW SGRSQENARR ARDDLFSLQN SRKVRDGGQA ALQDPTFMGE KIAKEKSFKH
QLADQPEGKE ALAAFDRIAD AQKAIRAVAQ RYRLLESGLG LNAESFRIAR ELLRAGDEHP
KPNGERLKEF TDARRESFEL ELFSDKPIYA DYEILTLADS LTDLVEQLGY HDPLVQRVLA
GKSPRARAAE LINDTQVRDV AFRKQLYEGG ATAVTAAKDP MIELARLVDP EARTLRKTVE
AQDEIKQQAQ AAIGRARFAV EGTANYPDAT FTLRLSYGAV KGYEENGQHV PAMTNFAGLY
ARSAEQNNQP PFDLPPRWVA RKAALDLTTP FNFVSTADII GGNSGSPVVN RAGEFVGIIF
DGNIYSLVAD FGYEDKLSRA LSVHSAGILE ALRKIYEVPA LADELVKGHR
|
|---|
| |