| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0605 |
|---|
| Symbol | |
|---|
| ID | 6205044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 737559 |
|---|
| End bp | 741194 |
|---|
| Gene Length | 3636 bp |
|---|
| Protein Length | 1211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641690228 |
|---|
| Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001817495 |
|---|
| Protein GI | 182412429 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCA ACGGCCGCAA GACCACTTTT AAGATTCTCG ACGGCAACGA GGCGGCAGCC
TCCGTTGCTT ACCGGCTCAA CGAGCTGATC GCGATTTACC CGATCACCCC GTCGTCTCCG
ATGGCGGAAT ATTGCGACGA ATGGGCCGCA GCTGGAAAGA AGAACCTCTG GGGCGAGATC
CCGCGCATCG TCGAGATGCA GTCCGAAGGC GGCGCCGCGG GTGCCGTGCA CGGCGGATTG
CTGGGCGGCG CGCTCACCAC GACGTTCACT GCATCGCAGG GCCTCCTGCT GATGGTTCCC
AACCTCTACA AGATCGCGGG CGAGCTGCTG CCGCTCACGA TCCATGTCAG CGCCCGCGCG
CTCGCCGCGC AGGGTCTCTC GATCTTCGGC GACCAGGCCG ACGTCATGGC CTGCCGCGCC
ACGGGTTGCG CGCTGCTGTG CAGCAACTCG ACGCAGGAAG CGCACGACTT CGCGCTGATC
GCCATCGCCG CGAGCTATCG CAGCCGGGTG CCGTTCATTC ACTTCTTCGA CGGCTTCCGC
ACCTCGCACG AGGTGCAGAA GATCACCACC ATCTCCGATG ACGAGATTCG CGCGGTCATC
GACGAGAAGG ATATCGCCGC GTTCCGCGCG CGGATGATGA CGCCCGACAA GCCGACGCTG
CGCGGCACCG CCCAGAACCC GGACGTGAAC TTCCAGGGTC GCGAGGCCGT GAACCGGTTC
TACGACGCCC TCCCCACCAT CGTGCAGGAA ACGATGGATC GTTTCGCCGC GGTCACCGGC
CGCGCCTACA AACTCTTCGA CTACCACGGT CATCCCGAAG CCGAGCGCGT CGCGATCGCG
ATGGGCAGCG GCGTGGAGAC GCTCTGCGAG ACGGCCGACT GGCTGGCCGC CAAGGGCGAG
AAGGTCGGCG TGATCGCCGT CCGCCTGTTC CTCCCCTTCC ATGTGAAGTC CTTCATGGCC
GCGTTGCCGA AGACGGTGAA AGCCATCGCG GTGCTCGATC GCACGAAGGA GCCGGGCGCG
CTCGGCGAGC CGCTCTACCA GACCGTCATC ACCGCGCTGG CCGAAGCCCG CTCCGAGCTC
GCGGGTTCGC CGCGCGTCGT CGGCGGCCGC TACGGCCTCG GCTCGAAGGA ATTCACGCCC
GCCATGGTGC GCGCGGTCTT CGAGAACCTC TCGCGCTGGG AGCCGAAGAA TCATTTCACG
GTCGGCATCA TCGATGACGT CACCGGCACC TCGCTGCCGT TCGACGCCGA GTGGGACATC
GAAGCCGACG ACGTTCGCCG CTGCGTGTTC GTTGGACTCG GCGCTGACGG CACGGTCGGC
GCGAACAAGA ATTCGATCAA GATCATCGGC GAACAGACGG ATTTCTACGC GCAGGGCTAC
TTCGTCTACG ACTCGAAGAA GTCCGGCTCG GTCACGACGT CGCACCTGCG GTTCGGCCCG
CGGCCGGTGC ACGCGCCGTA TCTCATCCGG CAGGGCGGCT TCGTCGCCTG CAGTCAGTTC
AGCTTTGTCG GACGCACCGA AGTGCTCGGC TACGCCAAGC CCGGCGCCAC CGTGCTGCTC
AACTCGCCCT ACTCGCCCGA GCAAACCTGG AAGGTCCTCC CGCGCGAATG GCAGTCGACG
CTCATCAGCA AGAAGCTCCG GCTGTTCGTG ATCGACGCGA CGAAGGTTGC GCACGACAGC
GGCATGGGCC GTCGCACCAA CACGGTGTTG CAGACCTGCT TCTTCGCACT CTCCGGCGTG
CTCCCGCAGG ACGAGGCGAT CGCCCACATC AAGAAGGCCA TCACCAAGAC CTACGGCCGC
AAGGGCGAGA AGGTCGTGCA GATGAACCAT GCCGCGGTTG ACGCCGCGCT CGCCGGACTC
TTCGAGGTGA AGATTCCCGC CGCGCCGGAA ACCGAGGCGG TTGCCACCGT GCCTCCGGCC
TACGCCGACG CGCCGGAATT CGTCCGCCAG GTCACCGCCA AGCTGCTCGC CAACGAAGGC
GATCTCATGC CGGTCAGCGC CATCCCGCTC GACGGCTGCT GGCCGACGGG CACCGCGCGG
TTCGAGAAAC GCAACATCGC GCTCGAGATT CCCGTCTGGG ACCCGGCGAT CTGCATCCAG
TGCAACAAGT GCGCGATGGT TTGCCCGCAC GCCGCGATCC GCCCGAAGTT CTTCGATCCG
GCCGAGCTGG CCAAAGCCCC CGAGGGCTTC CAGTCCGTGC CGTTCAAATC CACCGAGTTC
GCCGGCCGGC ACTACACGCT GCAGGTCGCC GCGGAAGATT GCACCGGCTG CTCGATCTGC
GTGCAGGTCT GCCCGGCCAA GGACAAGACC AATCCGAAAC ACAAGGCGAT CGACATGACG
CCGCAGGCCC CGCTGCTCGC GAAGGCCCGC CGGGATTGGG ACTTCTTCAC CAAGCTGCCT
GATCCGGACC GCACCAAGAT CGACGTTTCG ACGGTCAAGA ACGCGCAGTT CCTCACGCCG
CTGTTCGAAT TCTCCGGCGC GTGCGCCGGT TGCGGCGAGA CGCCTTACAT CAAGCTCATC
ACGCAGCTGT TCGGCGACCG CATGGTCGTC GGCAACGCGA CGGGCTGTTC CTCGATCTAC
GGTGGCAACC TGCCGACCAC GCCTTACTGC AGCGATCACC ACGGCCGCGG TCCGACCTGG
GCCAACTCGC TCTTCGAGGA CAACGCCGAG TTCGGTCTCG GCCTGCACCT CGCGGTCGAG
CAGCGCGCCC GCACCGCGAA GGAGATGCTC AACCGGCTCG CGCCGAAACT CGACGCCGGG
CTCGTGCAGT CGCTCCTCAG CGCCGACCAA TCGAACGAAG CTGGCATCGC CGCGCAGCGC
GAACGCGTCG CCCAGTTGAA GGATGCCCTC CGTGCGATGG ACAGCTTCGA GGCCAAGCGG
CTCGCGTTCC TCGCGGACGA TCTCGTCAAG AAATGCACGT GGATCTTCGG CGGTGACGGC
TGGGCTTACG ATATTGGCTA CGGCGGACTG GATCACGTCC TCGCCTCCGG CGCGAACGTC
AAGGTGCTGG TCCTCGACAC CGAGGTTTAT TCCAACACCG GTGGCCAGTC CTCGAAGGCC
ACGCCGATGG GCGCGGTCGC GAAGTTCGCC GCTTCCGGCA AGGCGATCGC CAAGAAGGAT
CTCGCGCTGA TCGCGATGCA ATACGGCCAC GTCTACGTCG CGCGCGTCGC CTTCGGCGCC
AAGGACAGCC AAACGCTGCA GGCGATCCGC GAAGCCGAGG CCTACAACGG CCCCGCGCTG
ATCATCGCCT ACTCGCACTG CATCGCGCAC GGCTTCCCGC TGGAGCACGG ACTCGAGCAG
CAGAAGCTCG CGGTGGACAC CGGCTACTGG CCGCTCTTCC GCTACGACCC GCGACTGGCG
GCCAAGGGCG AAGTGCCGCT CAAGCTGGAC TCCCCGGCGC CAAAGACGGA GCTCGCCAAG
TTCATGGCCA ACGAGACGCG GTTCGGCATT CTCCGCAATG TCGCCCCGGC TCGCGCCGAG
GAACTCGCGA CGCAGGCCCA GGCCCAGGTG CGGCAGCACT ATGCGCTGTA TCAGCATCTC
GCCTCGCCGG CGCACACCAA CGGCAACGGC CACGCGCCGG CCGCCGCGGT GCCCGCGCCC
AAGCCGGTGA CGCCGCCGAA GCCTTCCGCT TCCTAA
|
|---|
| Protein sequence | MNTNGRKTTF KILDGNEAAA SVAYRLNELI AIYPITPSSP MAEYCDEWAA AGKKNLWGEI
PRIVEMQSEG GAAGAVHGGL LGGALTTTFT ASQGLLLMVP NLYKIAGELL PLTIHVSARA
LAAQGLSIFG DQADVMACRA TGCALLCSNS TQEAHDFALI AIAASYRSRV PFIHFFDGFR
TSHEVQKITT ISDDEIRAVI DEKDIAAFRA RMMTPDKPTL RGTAQNPDVN FQGREAVNRF
YDALPTIVQE TMDRFAAVTG RAYKLFDYHG HPEAERVAIA MGSGVETLCE TADWLAAKGE
KVGVIAVRLF LPFHVKSFMA ALPKTVKAIA VLDRTKEPGA LGEPLYQTVI TALAEARSEL
AGSPRVVGGR YGLGSKEFTP AMVRAVFENL SRWEPKNHFT VGIIDDVTGT SLPFDAEWDI
EADDVRRCVF VGLGADGTVG ANKNSIKIIG EQTDFYAQGY FVYDSKKSGS VTTSHLRFGP
RPVHAPYLIR QGGFVACSQF SFVGRTEVLG YAKPGATVLL NSPYSPEQTW KVLPREWQST
LISKKLRLFV IDATKVAHDS GMGRRTNTVL QTCFFALSGV LPQDEAIAHI KKAITKTYGR
KGEKVVQMNH AAVDAALAGL FEVKIPAAPE TEAVATVPPA YADAPEFVRQ VTAKLLANEG
DLMPVSAIPL DGCWPTGTAR FEKRNIALEI PVWDPAICIQ CNKCAMVCPH AAIRPKFFDP
AELAKAPEGF QSVPFKSTEF AGRHYTLQVA AEDCTGCSIC VQVCPAKDKT NPKHKAIDMT
PQAPLLAKAR RDWDFFTKLP DPDRTKIDVS TVKNAQFLTP LFEFSGACAG CGETPYIKLI
TQLFGDRMVV GNATGCSSIY GGNLPTTPYC SDHHGRGPTW ANSLFEDNAE FGLGLHLAVE
QRARTAKEML NRLAPKLDAG LVQSLLSADQ SNEAGIAAQR ERVAQLKDAL RAMDSFEAKR
LAFLADDLVK KCTWIFGGDG WAYDIGYGGL DHVLASGANV KVLVLDTEVY SNTGGQSSKA
TPMGAVAKFA ASGKAIAKKD LALIAMQYGH VYVARVAFGA KDSQTLQAIR EAEAYNGPAL
IIAYSHCIAH GFPLEHGLEQ QKLAVDTGYW PLFRYDPRLA AKGEVPLKLD SPAPKTELAK
FMANETRFGI LRNVAPARAE ELATQAQAQV RQHYALYQHL ASPAHTNGNG HAPAAAVPAP
KPVTPPKPSA S
|
|---|
| |