Gene Oter_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0553 
Symbol 
ID6208326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp667465 
End bp669036 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content66% 
IMG OID641690175 
Producthypothetical protein 
Protein accessionYP_001817443 
Protein GI182412377 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.576668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC TGATCGTTAC GTGCGACGGC ACGTGGAACA CCGCTGACCA GAAACAGGAC 
GACATCCCCG CGCCGACCAA CGTTGTGCGC CTCTACAACG CGCTCGCCAA ACAGGACGCC
GCCAGCAACG AGCAGCGCAA GTATTACCAC CCTGGCGTGG GCACCGAGGG CTCGAAGCTC
GAACGGCTCG GCGGCGGCGC CTACGGCCTC GGCATCAGCC GCAACATCAT GAGCGGCTAC
CGCTGGCTCG CCGATCACTA CGAGACGGGC GACCAGATCT TCCTTTTTGG GTTCAGCCGC
GGCGCCTACA CCGCGCGCAG CCTCGGCGGA TTCATCGGCT GCTGCGGACT GCCCGACCTC
GCCGGACTTT CACCGGCCGA CGCTTGGAAG CGCGTCGAGC AGGCCTACCA CACCGTGTAT
CGCGTGAAGC CCGCCGAGCG CCCGCCCATC TCGTGGCCGG TGCTTTCTCC CGGCGCCGGG
CAGACGAAAA TCCCGCTTCA GTTTATTGGC GTGTGGGACA CCGTCGGCGC GCTCGGCGTG
CCGGACGATC TCGCGCTGCT CAACCTGCTG GACGATCCGA CGAAGTGGCA GTTTCACGAC
ACCACGCTCG GCGATCACGT GCGCTTCGCG CGGCATGCCG TCGCGATCGA CGAGCTGCGC
GCGAGCTTCA CGCCCACGTT TTGGACCGAC GACCACGATC GTCCGCTCAA TGACGGGACT
CGCGTGCGGC AACTCTGGTT TCCCGGCGTG CACAGCGACG TCGGCGGCGG CTACGCGCAA
TGCGGACTTT CGGACCTCGC GCTCGCGTGG ATGATCGACG AGGCCGCGAC CGCGGGCCTC
GCATTCCTGC CGTCCTATCG CGCGCAGATC AAACCCGATC CCCGCGGTCT CCTGCACGAT
TCCCTCGGCG GCGCGTTCAA AGCCCTGCAC TCGCGGCCGC GCAACCGCCC GCGCCTGACC
CCCGACGCGC CCGATTACCA CCCGAGCGCT TGGGATCGCG ACGAAGCGCC GCCAATCACG
CAGTCACCTT ATCATCACCC GAGCGTCGCG CTGCAGGTCG GCCAGAGCAG CGAGCCCATC
GACGTCTACG CGCGCAATCA CTGGAACGAA ACCGGGCTCT TCCTCGAGGA CGGCGCCACC
TACGAGTTCA CGGCGAAGGG TGAATGGGTG GACAAGAGCA TCCCCTGCGG ACCAGCAGGC
ACCAACGACG GCAAGTTTCA CCTTGGCGAG GTGGTCCAGC TCGCGGGCAC GCTGCTAGGC
AAACTCGAGT CGGGCTTCCG CAAAGTCAGC GGCAACGCCG AAGCCGACTT GATCGGCACG
CGTCGCGCCG AGGAGCACCC GTGGTTCGCG CTGCTGGGCG CGATCGCCAA CGACGGTCCG
CAACAAGGCA AGAATCCCAG TCCCGACGGC TCGCCGTATC CGCACCAGAC TTTCCTAATC
GGGAGCGGCC CGACGCGGCT TACGCTGAAG CCGACCGAGG CCGGCTACCT CTATGCGTTC
GCGAACGACG CGTGGCATTT TTATGAAAAC AACCGCGGCA GCGTGACACT CACGGTGAAG
CGCGTTGCGT GA
 
Protein sequence
MKNLIVTCDG TWNTADQKQD DIPAPTNVVR LYNALAKQDA ASNEQRKYYH PGVGTEGSKL 
ERLGGGAYGL GISRNIMSGY RWLADHYETG DQIFLFGFSR GAYTARSLGG FIGCCGLPDL
AGLSPADAWK RVEQAYHTVY RVKPAERPPI SWPVLSPGAG QTKIPLQFIG VWDTVGALGV
PDDLALLNLL DDPTKWQFHD TTLGDHVRFA RHAVAIDELR ASFTPTFWTD DHDRPLNDGT
RVRQLWFPGV HSDVGGGYAQ CGLSDLALAW MIDEAATAGL AFLPSYRAQI KPDPRGLLHD
SLGGAFKALH SRPRNRPRLT PDAPDYHPSA WDRDEAPPIT QSPYHHPSVA LQVGQSSEPI
DVYARNHWNE TGLFLEDGAT YEFTAKGEWV DKSIPCGPAG TNDGKFHLGE VVQLAGTLLG
KLESGFRKVS GNAEADLIGT RRAEEHPWFA LLGAIANDGP QQGKNPSPDG SPYPHQTFLI
GSGPTRLTLK PTEAGYLYAF ANDAWHFYEN NRGSVTLTVK RVA