Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0485 |
Symbol | |
ID | 6207249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 570994 |
End bp | 571509 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641690107 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_001817375 |
Protein GI | 182412309 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.130232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCTCCT CCAACACCGA TCTCACCTAC AGCAGCGCCA TCGAAGGCGG CATCGTCGTT TCCAAAGCCG ATGCGGTGAT CAACTGGATC CGGACGAATT CAATGTGGCC GATGCCCATG GGACTGGCCT GCTGCGCGAT CGAGCTGATG CAGGTCGGCA ACGGCCGGTT CGACATTGCG CGATTCGGGG CCGAGGTCAT GCGCTTCTCG CCGCGGCAAT CCGACTGCAT GATCGTGGCG GGCAGCGTCA CGTACAAGAT GGCGCCGCAG ATCCGCCGCA TCTACGACCA GATGATGTCG CCAAAATGGG TGATCGCGAT GGGCGCCTGC GCCAGCTCCG GCGGGATGTA CCGCAGCTAC GCGCACATGC AGGGCGTCGA CCGGATCCTG CCGGTGGACG TTTACATCAG CGGTTGCCCG CCGCGCCCGG AAGGGATTCT CGACGCGCTG ATGAAATTGC AGGCCAAGAT CCGCACAGAA CGCGCGGGTC AAAACCTCTT CAAAGCCACC GTCTAG
|
Protein sequence | MVSSNTDLTY SSAIEGGIVV SKADAVINWI RTNSMWPMPM GLACCAIELM QVGNGRFDIA RFGAEVMRFS PRQSDCMIVA GSVTYKMAPQ IRRIYDQMMS PKWVIAMGAC ASSGGMYRSY AHMQGVDRIL PVDVYISGCP PRPEGILDAL MKLQAKIRTE RAGQNLFKAT V
|
| |