| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0455 |
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| Symbol | |
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| ID | 6207925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 531318 |
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| End bp | 532634 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641690077 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001817345 |
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| Protein GI | 182412279 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase
[COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.498543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.654458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG TCACCGGTAT CATTCTCGCG GGCGGCTCCG GCAATCGGTT CGAGGCCGAC
GTCCCGAAGC AGTTCTGCCT CCTCAATGGC AGCATGGTGA TCGAGCATGC TGTGGCCACC
TTTCGTACAT CCGGGCTCTT CAACAAGATA ATCGTTGCGC TGTCGCCAGA ATGGCTGGAT
CACCCGCGTG CCGCGATCGG TGATGTCAAC ATTGCCGGTG GGAACACCCG CAACGAATCG
ACGTGGAATG CTCTGCAGGC GTGTGATCCC GACACGGATT ACGTCATTAT TCACGACGCA
GCGCGCCCCT TCGTCACCGA GCAGATCCTG AAGGATTGTG TCGACGCGTT GCGGGAGAAC
GATGCCGTCG ATGTTTGTAT CCCGGCGGAC GACACGATCG TGAAGGTCGC CGATGGATTC
GTGGAAAGCA TTCCCGATCG CAGCAAGCTG ATGCGCGGTC AAACGCCGCA GGGGTTTCGC
TTCGGCGCGC TGCACGAAGC CTACCAAGCG AATCTTGGCC GGCTGACGGC GACAGACGAC
GTGGGTATCT TCCTGCGCTC TGGCGGGCGC TGCAAGGTCG TGCAGGGGTC TCCGTTCAAT
CTGAAGATCA CCTATCCGCA CGATCTCTTC GTGGCGGAGC GAATCCTGCA GTATCAGCCC
GGGAATCCCA ATCCCCAGCT CAACCTTCGG GGGAAGCAGA TCCTCCTGCT GGGCGCGACG
GGCGGCATTG GCTCTGTTGT GCACGAGCTG CTCCGCACCC ATGGAGCCGT CGTGACTACA
CCGACCCGCC ACGAATGGGA CTTGGCCTCG CCGACGATCC CGCCGGCGTT TCTGCGTCCA
TGGGACGCTG TCATTCACTC CGCCGGCGTG CTGAGCAACG CCAGCAGCGC CATGGATGTC
GATTCGCTGT TTGCCGTGAA CTTCCGTTCG GTGGTTTCGG TCACTGACCT GGCTCGCCGG
GCCATGCGCG GAGGTGCGAT CGTCGTGGTC GGATCGAGTT CTGCCACGAA GGGACGGGAG
AACATTCCGC TGTATGCGGC TTCCAAAGCG GCCGTGAACA ATTTTGTTGA AGGGATAGCT
CCGGTTCTCG CGCGCGAGTG CCAGGTCAAG ATCAACTGCA TCAATCCCGG CTGTGTGAAT
ACGCGAATGA TCACGACCAG CCGTGTGACT AACAAGGACC CGCTGGATCC AACCGAGGTG
GCTGAACTAA TCGTGGCGTA CACTCAGCCG TTGGACACCG GCCAGGTGGT AAACCTGCGA
AAATACGTTC CAGTCGCTTC AAGGGGAGGA GCCAGATTGG TGCGGCAGGT TGCCTAG
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| Protein sequence | MKKVTGIILA GGSGNRFEAD VPKQFCLLNG SMVIEHAVAT FRTSGLFNKI IVALSPEWLD
HPRAAIGDVN IAGGNTRNES TWNALQACDP DTDYVIIHDA ARPFVTEQIL KDCVDALREN
DAVDVCIPAD DTIVKVADGF VESIPDRSKL MRGQTPQGFR FGALHEAYQA NLGRLTATDD
VGIFLRSGGR CKVVQGSPFN LKITYPHDLF VAERILQYQP GNPNPQLNLR GKQILLLGAT
GGIGSVVHEL LRTHGAVVTT PTRHEWDLAS PTIPPAFLRP WDAVIHSAGV LSNASSAMDV
DSLFAVNFRS VVSVTDLARR AMRGGAIVVV GSSSATKGRE NIPLYAASKA AVNNFVEGIA
PVLARECQVK INCINPGCVN TRMITTSRVT NKDPLDPTEV AELIVAYTQP LDTGQVVNLR
KYVPVASRGG ARLVRQVA
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