Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0449 |
Symbol | |
ID | 6205272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 524296 |
End bp | 525825 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641690071 |
Product | hypothetical protein |
Protein accession | YP_001817339 |
Protein GI | 182412273 |
COG category | [S] Function unknown |
COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.655171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCGACG CCGTTCCGAA GTCAAGCGAG TGGCTGCTCT GCCAACCGGT CCCAAATGCC ACGACATGCA TTCTCGTCGG CGCACTCGGC TCGTTGCCAG CGGTCGAATT CCAGCGTTTC CAGCAGGTGC TTTGGTTCGT CGACGCCGCG CATCAAGCAT TGCCGGTCGC GCTGCGCCCT GAGCGAATCC AACGAGTACT GGTGGAAACG ACCCCTCCCG CGGAAGCGGC AAACCGACTC GAACAGTTTC TCCGCCGCAA CCCCCGGCTC CTGCCGTCGC TATTCGTCAC GCGGCAGATT CTCGTGCACC ACCCCGCCGC TTATGCGGCG GTCGTCGATG AAATTCACCG CCAGATGGAA TCCACGCACC GCGCGCGACT CACGCGCCAG CTGGACGGGT TCACCTGGCA AAAACACATC CTCGGCAACG CCGCCGCTTA TGCCGCGCGC CGGCTGCCGG CCGAATGGAC CGGGGCGCTG CACGACGTGC CGGCCTTCGT CTGCGGCGCG GGTCCCTCGC TCGACGTGTC CGTTGCGCCG CTCGCCGCCT ACGCGAAGCA CGCCGTCGTT TTCGCCGCCG ACTCGGCGCT GCGGGCGCTC GCCCGCCACG GCGTGCACGC CGACTTTGCC ATCTCGATCG ATGCCGCGAA AATCCCGGCC AAGTGCCTGC CTGACCGGCT GCCACCGACC CGCGTCGTGC TGGCGAGTGT GAGTCCGCCC GAATGGCAGC AGGCGCTACC CGACACGGGC ACGTGTTTTC TTAGCAGCAA TCAATTGACG GACGACTGGT TCGCCGCGCA GGGCGTCGCC CGCACGGCGA TCGCCGCCAG CGAGAGCTGT GGAAGCACGG GTATCGATCT CGCGATCCAT CTCGGCTGCG GTCCGATTTA CCTCTTCGGC ATCGACCTCG CCGTCGATCC CAGCAATCAG GCGCAACGCC ACCAGCGCGA TGCCGATCCC ACGCTCTACC AGCAGTCCAA CTACGACCCG ACGGCGCAGC TCCCGCGCGT GCCCGGCAAC TACGTGGATC AGGTCCCTTG TTTCGCCTTG GGCGATTGGC GCGCCCTCGA CGAGCGGCTC GCCGCCCGCA CGTCACCGAC GATCTACAAC GTGAATGATC GCGGCGCCCG GCTGCGCGGC ACAACGCTCG TGCATCCCGG GCGCCTGGCC GAGCCAAGAA CGTCTCGCGA GAAGGCCGGC GCACTCGCAG CACTTGCGAC TCCGACCGCA GCTTCCGCCG TGGGTAGTGT GCCCTTGCTC CGATTGCGCA CCGTCGGTGA GCGGGGCACT CGATCCATTC CGGCCCTCCG CCAAGCCTTG GGCCGCGGCG GTCCCAGCTG CATGGCCCCA CTGCTTCAGC GGCTGCTACT GGAGCCGGAC TGCGGCCGGG CGCTCGGCGC GTTTTCGCTA AAGGTCATGC CCCATCTTGT GCCCCCGATC GAAGGCTCCC CCGAGTTCTG GTCTGCGCTG CTCGACGAGT TCGCGCAGCT CAGTCAGCTC GCGCAGCAGA TCAAGCTGCC AGACGAGTAA
|
Protein sequence | MSDAVPKSSE WLLCQPVPNA TTCILVGALG SLPAVEFQRF QQVLWFVDAA HQALPVALRP ERIQRVLVET TPPAEAANRL EQFLRRNPRL LPSLFVTRQI LVHHPAAYAA VVDEIHRQME STHRARLTRQ LDGFTWQKHI LGNAAAYAAR RLPAEWTGAL HDVPAFVCGA GPSLDVSVAP LAAYAKHAVV FAADSALRAL ARHGVHADFA ISIDAAKIPA KCLPDRLPPT RVVLASVSPP EWQQALPDTG TCFLSSNQLT DDWFAAQGVA RTAIAASESC GSTGIDLAIH LGCGPIYLFG IDLAVDPSNQ AQRHQRDADP TLYQQSNYDP TAQLPRVPGN YVDQVPCFAL GDWRALDERL AARTSPTIYN VNDRGARLRG TTLVHPGRLA EPRTSREKAG ALAALATPTA ASAVGSVPLL RLRTVGERGT RSIPALRQAL GRGGPSCMAP LLQRLLLEPD CGRALGAFSL KVMPHLVPPI EGSPEFWSAL LDEFAQLSQL AQQIKLPDE
|
| |