Gene Oter_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0425 
Symbol 
ID6205397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp500858 
End bp501190 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content63% 
IMG OID641690047 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001817315 
Protein GI182412249 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCCG TCGGCACGAT TTCTCCTCTC CAATCCGGCC TGCTCACCCG CATCGACGCG 
CCGCTGCCGA AGACGGCGCT CACGCCTTCG GGTCCGCTCA CCGCGACCCC CACGCAGGGC
TTCGGCCAAC TGCTCGATGG CGTGGTGGGC ACGGTGGTGG AAAAACAAAC CATCGCGCAG
GAGGCGACAC GCAAGGTTCT GCTCGGTGAA TCCGATCAGC TCCACCAAAG CGTGATCGCG
ATGCAGGAAG CCTCGGTGGC GTTCTCCATG ATGGTGGAGG TCCGCAACAA GCTCGTGGAA
TCGTATCAGG AGCTGATGCG CATGCAGGTG TGA
 
Protein sequence
MSPVGTISPL QSGLLTRIDA PLPKTALTPS GPLTATPTQG FGQLLDGVVG TVVEKQTIAQ 
EATRKVLLGE SDQLHQSVIA MQEASVAFSM MVEVRNKLVE SYQELMRMQV