| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0412 |
|---|
| Symbol | |
|---|
| ID | 6208237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 489417 |
|---|
| End bp | 490472 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641690034 |
|---|
| Product | flagellar motor switch protein FliM |
|---|
| Protein accession | YP_001817302 |
|---|
| Protein GI | 182412236 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.988738 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG ATCCCTCCAA CTCCACCGGC AGCATTCTCG ATCAATCCGA GATCGATAAG
CTGCTCGCGC AGGAAATGGC GGTTGCCCCG CCGAAGCAGT TCCTGCTCCG CCCCGAGGGC
GCGCGCGGGC CCACGCCGGT CCTGAAGGTT GAGCCTTACG ATTTCCGCAA TCCGGTTTTC
CTGTCCGAGG TGGAGCTGCG CCGGCTGCGG CTGCTGCACG AAGATTTCAT CCGCTATCTC
GCCGCGCGAC TCTCGCTCTA TCTGCGGATG GAGCTGGGGC TGAAGATGGC GAAGCTGACC
ACCGCCACCT ACGCCAAGTT CACGGACTCG TTGCCGAGTC CGACGCACCT GTGCCTCTTC
AAGGTCGAGC CGCTCATCGG CGTCGGGATT CTCGACATCA ATCCGCGTCT CGCGCTCACC
ATCGCCGACC GGCTGCTCGG CGGCCGTGGC CATTCCGTCA AAGCCGAGCG CTATCTCACC
GAAATCGAAA TCGCGCTGCT GGAGGACGTG GTGAACATCG TCCTCGAAGA ATGGTGTACG
CAGTGGAAAA CCGAGCAGGA GCTGCGGCCG CAGATCATCG GCCATGAAAA CAACGGCCGG
TTCCTGCAGA CTTCGCCCAA GGACGCGATC GTCCTGATCC TCACGCTCGA GGCCAACTTC
GGCGATTGCT CCGAGCAGAT CCAGATCGGC GTGCCGTATT ACACCATCGA GCCGGTGGTG
AAAAAAATGC AGGCGCGCCG GCAGAAGGAC ACCGCCGTCT CCACCACCGC CAAGAAGGCG
GAGTGGCAGG CCGCCTACGA GCACATCAAG GTGCCGGTGC GGGCCGAGTG GTCGGCGATG
GACATCAGCC TGCGCGAGGT GGTCAGTCTC CGCGTCGGGG ACGTGTTCGA ACTGCCCGCT
TCCATTTTTC ACGAAACCCG CGTGCTGCTG AACAACGTGC CCAAGTTTGT TGGCACGGTC
GGCCTCGACA GCGATCGCGT GGCCGTGCAG CTCACGCGCA AAACCGTCCC GGGTCCTGCG
AACCCGCTCA AATCCGATGG AAGAAAAAGC CCTTGA
|
|---|
| Protein sequence | MADDPSNSTG SILDQSEIDK LLAQEMAVAP PKQFLLRPEG ARGPTPVLKV EPYDFRNPVF
LSEVELRRLR LLHEDFIRYL AARLSLYLRM ELGLKMAKLT TATYAKFTDS LPSPTHLCLF
KVEPLIGVGI LDINPRLALT IADRLLGGRG HSVKAERYLT EIEIALLEDV VNIVLEEWCT
QWKTEQELRP QIIGHENNGR FLQTSPKDAI VLILTLEANF GDCSEQIQIG VPYYTIEPVV
KKMQARRQKD TAVSTTAKKA EWQAAYEHIK VPVRAEWSAM DISLREVVSL RVGDVFELPA
SIFHETRVLL NNVPKFVGTV GLDSDRVAVQ LTRKTVPGPA NPLKSDGRKS P
|
|---|
| |