Gene Oter_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0227 
Symbol 
ID6207690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp252345 
End bp252653 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content59% 
IMG OID641689848 
Productribosomal protein S10 
Protein accessionYP_001817118 
Protein GI182412052 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGTC AACGCATTCG CATCAAACTC CAGGGCTTCG ACTATCGCGT GATCGATCAG 
TCCGCGCTCG AGATCGTCGA GACCGCCAAG CGCTCCGGCG CCCGCGTGTC CGGCCCGATC
CCGCTGCCGA CCCGGGTGGA AAAACTTTCG GTCAATCGTT CGCCGCACGT CGACAAGAAA
TCGATGGAGC AGTTCGAAAC CCGCACGCAC AAGCGGCTCA TCGACATCAT CGAGCCGACC
GCCCAGACGG TCGACGAGCT CAAGAAACTC AACCTGCCTT CGGGCGTGGA TATCACCATC
AACGTTTAA
 
Protein sequence
MKGQRIRIKL QGFDYRVIDQ SALEIVETAK RSGARVSGPI PLPTRVEKLS VNRSPHVDKK 
SMEQFETRTH KRLIDIIEPT AQTVDELKKL NLPSGVDITI NV