Gene Oter_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0135 
Symbol 
ID6206882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp162612 
End bp164711 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content63% 
IMG OID641689756 
Productsmall GTP-binding protein 
Protein accessionYP_001817026 
Protein GI182411960 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.59489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.962652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT ACGCCGCTTC CGACCTGCGC AGTTTCGCTG TTGTCGGACA CGCCTCCTCC 
GGGAAGACCA TGCTCTGCGA AGCCATGCTG GCTTGTTCCG GCCGGATCGG CCGGATGGGC
AGTATCGCGG CCGGCACGAC GGTCTCCGAC TATCATCCCA GCGAGAAGCA GCACCAGATT
TCCGTGCACG CCTCGCTGCT GAACACGGAG TGGCAGAACC GAAAGTTCAA CCTCATCGAC
TGCCCCGGCT ATGCGGACTT CATTAGTGAA GCCTTGAGCG CCTTGCGCGT CGGCGATTTC
GCCCTGCTCG TGATCAACGC CGCCCACGGC ATCGGCGTCG GCACCGACGC GATGTGGGCC
AACGCCACGC TGCACGGGCT GCCGCGGATG ATTGTGATCA ACGGGCTCGA CAAGCCGAAC
GTGAATTTCG ACCAGGTCCT GGCGGACTGC CGTGCGCACT TCGGCAAGAA CGTCTTCCCG
CTCTCGATCC CGCTCGATGC CGGCCCCGGT TTCAGCCGCG TGCTCGACGT GCCCCGCAGC
GAGGTCACCA CCTACAAGCC GGGCACCAAC GGCGCCTACA CGGAAATTGC CACCGATGGC
GAGCTCGCCG AGCGCGTACA CCAGCTGCAC AAGGAATTGA TCGAGTATGT CGCCGAGTCC
GACGACGCGC TGATGGAAAA GTTTTTCGAA CAAGGCGTGC TCGCGGAGGA GGAGATGCGC
GCCGGTCTGC ACAAGGCCAT CCAGAACCAG GTCTTCGTGC CCGTGTTCGC CGTCTCCGCC
GAAACCAACG TCGGCGTGGC GCGGCTCATG GACTTCATCG CCAAATACGG TTCGTCGCCG
CTCGATCGTT CGCAGGTCGA TGCGCTCGAC GCGAAAGGCG CGCACGTCAC TGTCCCCCTC
TCGCACGCCG AGCCCGTCGT CTACATCTTC AAGACGATGA ACGAGCCCGG CGTGGGTGAG
CTCTCGTTGT TCCGCGTTTA CTCCGGCACC GTCACAAGCG GTGCCGAACT GTTTAATTCG
AGTCGCAATG TCACCGAGCG GCTGGGGCAG ATCTACGTGC TCAACGGCCA CGAGCGCACG
CCCACGCAGA AACTGGGGGC CGGCGACATC GGTGCAGTCG TGAAGCTGCG CGATACGCAT
ACCGACGACA CGCTGTGCAG TCCGCGTTTC CAAGTGATCC TGCCCAAGGT GCAATTCCCG
AAGCCGAACA TTCACGGCGC GCTCCGGCTC AGGGCGAAGG GCGATGAGGA CAAGCTTGCC
GTGGGCCTTT CCACGCTGCA CTCGGAAGAT CCGACGTTCC ACTACCGCGT CGACGACGAG
CTGCACCAGA CGATCCTCTC CGGTCAGGGC GAGATTCATC TGCAGGTCAT CTGTGAGCGG
CTGCTGCGCC GGTTCGGCGT GAACGTCGAG CTGATCGAGC CGGGCATCCC GTATCGCGAG
ACGATCCGCG GGCGGGGCGA ATCCCGCTAC CGGCACAAGA AGCAAACCGG CGGCGCAGGT
CAGTTCGCCG AGGTGTGGCT CCGGATCGAA CCGGGCCCGC GCGACAGCGG CGTCGATTTC
AAGCAGTCGC TCGTGGGCAC GAACGTCGAT CGCGTATTCG TTCCCTCAGT CGAAAAAGGC
GTGAAGACTG CCTGCATCGA AGGCGTCCGT GCGGGCTTCC GCGTCACCGA CGTGAAGATC
GATTTCTTCG ACGGCAAGAT GCACCCGGTC GACTCGAAGG ATATTGCCTT CCAAGTCGCT
GGGTACCACG CGTTCAAGGA AGCCTTCCAA GCGTCGCAGC CGTGCATGCT TGAGCCGATC
TACAAGGTGT CGATTATGGT GCCTGAAGAA TACATGGGTG CCATCATGGG CGATCTCTCG
TCCCGCCGGG GCCAAATCCA GGGTGTCGAC AGCGACGGTC AGTTCCAAAT CGTGCGCGCC
GAAGTGCCGC AGAAGGAGCT GCATCACTAC AGCACTGTGG TGCGCTCGCT CACCAGCGGC
CGCGGCCGGC ACGACGAGGC CTTCAGCCAC TACGCCGAAC TCCCGGCTGA GCAGGAGGCC
AAGCTACTGG CCGAGGCCAA GGCCAAACGC GATGCCGCCC ATGGCGTAGT GACCAAGTAG
 
Protein sequence
MKDYAASDLR SFAVVGHASS GKTMLCEAML ACSGRIGRMG SIAAGTTVSD YHPSEKQHQI 
SVHASLLNTE WQNRKFNLID CPGYADFISE ALSALRVGDF ALLVINAAHG IGVGTDAMWA
NATLHGLPRM IVINGLDKPN VNFDQVLADC RAHFGKNVFP LSIPLDAGPG FSRVLDVPRS
EVTTYKPGTN GAYTEIATDG ELAERVHQLH KELIEYVAES DDALMEKFFE QGVLAEEEMR
AGLHKAIQNQ VFVPVFAVSA ETNVGVARLM DFIAKYGSSP LDRSQVDALD AKGAHVTVPL
SHAEPVVYIF KTMNEPGVGE LSLFRVYSGT VTSGAELFNS SRNVTERLGQ IYVLNGHERT
PTQKLGAGDI GAVVKLRDTH TDDTLCSPRF QVILPKVQFP KPNIHGALRL RAKGDEDKLA
VGLSTLHSED PTFHYRVDDE LHQTILSGQG EIHLQVICER LLRRFGVNVE LIEPGIPYRE
TIRGRGESRY RHKKQTGGAG QFAEVWLRIE PGPRDSGVDF KQSLVGTNVD RVFVPSVEKG
VKTACIEGVR AGFRVTDVKI DFFDGKMHPV DSKDIAFQVA GYHAFKEAFQ ASQPCMLEPI
YKVSIMVPEE YMGAIMGDLS SRRGQIQGVD SDGQFQIVRA EVPQKELHHY STVVRSLTSG
RGRHDEAFSH YAELPAEQEA KLLAEAKAKR DAAHGVVTK