Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0125 |
Symbol | |
ID | 6208183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 151568 |
End bp | 152401 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641689746 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001817016 |
Protein GI | 182411950 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only [S] Function unknown |
COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [COG4244] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.249783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCGT TGAAGGACCT CCTCGAAGGC AAGCCGCTGC GCTCCCCGCT GCACCCCTCG CTGGTACATC TGCCGGTGGC GTTGTTTCCC CTCAGTGTGC TGCTCGACAT CGCCAGCTGG ATCTTCGCCG ACCCGACGCT CTACCTCGTG CGCGGCGCAT TTCTCACACT CACGATCGGT CTGGTCACCG CCGTGTTTGC CGCCGTGTTC GGCATCGTCG ATTACACCGA GATCCGCTCC GACCATCCCG CCAAGAAAAC CGCGACGCTC CACATGGTGC TGAACCTTGT CGCCGTCGGG CTGTTCGCGC TGGGCGCCGG TCTCCGCTAC GGCAATCTCG ATGCCTCGCA CACGGCCGCT TTTCCGCTGA TCACCTCGCT GGTGGGTCTC GCGATCCTTG GCTATTCAGG TTATCTCGGC GGACACCTCG TCTACAGTGA CGGCGTCGCC GTGGGCCGCC ACCGGCGTGA CACCCGACTC CCGGAAAACA CGGTCACGGT CTCTGCCGCG GGCGCCGCTT CCGTCGTGGT GCCCGGAGCC GCCGAGCTCC GTCCCGGCGA GACGCTGCGC GCCGAGGTGG ACGGCACCGT GATGACGATC GCGCGCACGG CGAGCCAGAC CTGCGCCTTC CAGGAATTTT GCACGCATCG ATTTGGTCCG CTCTCGGAGG GCCGGATCGA AGGCAACGAG ATGGTGTGCC CGTGGCACCG CTCGCGCTTC GACATGCGAA GCGGCAAAGT GACCCAAGGG CCCGCGAACG TGGACCTGCG CACCTTCGCT ATCGAAACAC GCGGCGGGCG GGTCGCCGTC GAACGCCCGA CGAAGTCAGC TTGA
|
Protein sequence | MPALKDLLEG KPLRSPLHPS LVHLPVALFP LSVLLDIASW IFADPTLYLV RGAFLTLTIG LVTAVFAAVF GIVDYTEIRS DHPAKKTATL HMVLNLVAVG LFALGAGLRY GNLDASHTAA FPLITSLVGL AILGYSGYLG GHLVYSDGVA VGRHRRDTRL PENTVTVSAA GAASVVVPGA AELRPGETLR AEVDGTVMTI ARTASQTCAF QEFCTHRFGP LSEGRIEGNE MVCPWHRSRF DMRSGKVTQG PANVDLRTFA IETRGGRVAV ERPTKSA
|
| |