Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0051 |
Symbol | |
ID | 6208368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 62271 |
End bp | 63065 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641689672 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_001816942 |
Protein GI | 182411876 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.375271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTTCG ATTCGAAAAA ACTGCTGGTG ATCGCCGGCC CGTGTTCGTT GGAAAACGAG CGCGTGTGTC GCGCGGTCGC CGAGCGACTG CAGGAAATCC AGCGGGCGCA GCCGGAGCTG ACGCTGGTGT TCAAGGGCTC GTTCGACAAA GCGAACCGCA CCTCGCTCGC AGGCGACCGG GGCACGGGAC TCGAGGCGGG GCTCGAGTTG CTCGCGCTGA TCCGGCGCGA GTATGGATTC CCGGTGCTTA CCGACGTGCA CGAGCGGCCG CAGGTGCCGC AGGTGGCGGC GGTGTGCGAC GTGCTGCAGA TCCCCGCGTT TCTTTGCCGG CAGACCGATC TGTTGCTCGC GGCGGCGGCA ACGGGCCGGG TGGTCAACGT GAAGAAAGGG CAGTTTCTTT CGCCGCAGGA GATGCAATTC GTGACCGGCA AGCTGCGCGA GGGTGGGGCG CGTGAGGTCT GGCAGACGGA GCGCGGCACG ACGTTCGGTT ATCAAAACCT CGTCGTCGAC ATGCGTTCAT TTGCGATCAT GCGGCAGAAC GGTTACCCGA CGGTGTTTGA CGCGACGCAC AGCGTGCAGC TGCCCGGCGC GGCGGGTGGC AAGAGCGGCG GCCAGCGCGA ATTCGTGCCG CCGCTCGCGC AGGCGGCGTT GGCCGCGGGC GCGGACGGAC TGTTTTTGGA AACGCATCCC GACCCGGCGC ACGCGATCAG CGACGGTCCG AACATGATCC CGCTGGCCGA TTTGCCCGCG CTGCTCGCCC GTTGCGTGCG GATCTGGAAG GCCGCGCGGG AATAG
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Protein sequence | MLFDSKKLLV IAGPCSLENE RVCRAVAERL QEIQRAQPEL TLVFKGSFDK ANRTSLAGDR GTGLEAGLEL LALIRREYGF PVLTDVHERP QVPQVAAVCD VLQIPAFLCR QTDLLLAAAA TGRVVNVKKG QFLSPQEMQF VTGKLREGGA REVWQTERGT TFGYQNLVVD MRSFAIMRQN GYPTVFDATH SVQLPGAAGG KSGGQREFVP PLAQAALAAG ADGLFLETHP DPAHAISDGP NMIPLADLPA LLARCVRIWK AARE
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