| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0050 |
|---|
| Symbol | |
|---|
| ID | 6206269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 61652 |
|---|
| End bp | 62158 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641689671 |
|---|
| Product | biotin/lipoyl attachment domain-containing protein |
|---|
| Protein accession | YP_001816941 |
|---|
| Protein GI | 182411875 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.360909 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTT TCATCATCGA CGTGCCGGTG CCCTCGATGG GCGCGACTGT GAGCGAGCTC
AACGTGATCG TGGTCACGGT GAAACCGGGC GACCGCGTCG CGCGCGGACA ACGCCTCGGC
GACCTCGAGA GTGACAAATC GACCTTCGAA TTTGAGAGTC CCTGCGAAGG GGTGATTCGC
AACGTGGTGG CGCAAGTCGG GCAGACGCTG CAATCGGGGC AGGTTTTCTG TCAGATCGAA
ACGTCTGACG AGAGCCAACG GCACCTCGCC TCGAAATCGC CAGGCGGAAT CGCGCCGGCG
GCCGCGGCGC CGAGTGCGCC GGCGGCCGCG GCGCCGAGTG CGCCGGCGGC GCCGCCGAAA
CCGCTGGTGT GGACGCCGCG CGCGACGAAG CTCGCCCAGG AGGCCGGGTT GGATCCGGCG
AAGGTCACGG ACATCGAAGC CACGGGACCA GGCAACCGCG TGTCGGGTGA CGACGTGACC
GCATATCTCA AGAAGCGCCA AGGTTGA
|
|---|
| Protein sequence | METFIIDVPV PSMGATVSEL NVIVVTVKPG DRVARGQRLG DLESDKSTFE FESPCEGVIR
NVVAQVGQTL QSGQVFCQIE TSDESQRHLA SKSPGGIAPA AAAPSAPAAA APSAPAAPPK
PLVWTPRATK LAQEAGLDPA KVTDIEATGP GNRVSGDDVT AYLKKRQG
|
|---|
| |