| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0041 |
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| Symbol | |
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| ID | 6207122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 51605 |
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| End bp | 52942 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689662 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001816932 |
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| Protein GI | 182411866 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.161462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGG TGCTTATCGG TTCCGAATCC CAGAACCGCC GGTTGGTTAG CCTTGGGCTG
CACCGCCGCG GGGATGAAAC GTGCCAGCTC ACCCGCCGCG CGGAGCTCGC GCGGCTGCCA
GCGCTGCGCG AATGGCAGGT CGTGCTCCTC GACTGGGACC TGCGCACCGA CGGTGCCGCC
GAGCTGTTGC GCGAGCTGCA CGAACGCGAT CCGGAGCTGC CGGTGGTGGC CATCGTGACC
AATCCATCGG CGGCTGCCCA GGCGCGCACC GCCGGCGCGA CGGAGACCGT TTTCAAACCG
ATCAACATCG ACGAGGGGCG CGCACTGCTG CAGCGGGTCG CCCGCGCCGC CAAACCCGCG
GCATCCGCCG CCGAGCCCGC GGGCGACACG CGGTTCATCA CGCAGAGCGC GGCGATGGAG
CAGGTGCTCG CGATGGCCTG GCGCGTCGCG CCGACGTCCG CGTCGGTGCT GCTGCTGGGC
GAGAACGGCA CCGGCAAATC CATGCTCGCG CGCGCCGTCC ATGAGCACAG CACGCGCGCG
AATGGGCCCT TCATCAACGT GAACTGCCCG TGCCTGCAGC CGCAATTGCT CGAGAGCGAG
TTGTTCGGCC ACGTGCGCGG GGCTTTCACC GGCGCCGTCA GCGATGCCGT GGGCAAGGTC
GCAGCGGCCG AGGGAGGAAC GCTTTTTCTC GACGAAGTCG GCGAGTTGCC GCCAGAGATC
CAGGCGAAGC TGTTGCGGCT GCTGCAGGAG CGCTGCTACG AGCGCCTCGG CGAAGCCCAG
ACGCGTCGCG CGGACATCCG CGTGATCGCC GCCACCAATC GCGACCTGCG GCAACGCGTG
GCAGCGGGCG CCTTCCGTGA GGACCTCTAC TATAGGCTCA ACGTAATCAC CATCGAGATG
CCGTCGCTGC GGGGCCGGCC CGAGGACATC GTGCCGTTGG CCGAGCATTT TCTCGAGACG
CTGAGCCAGT CGGCCGGCGG GCCGCGCCGA CGGCTGACGC TGGCGGCGCG GGAGGCGCTC
GTGGCCCACA GCTGGCCGGG AAACCTGCGC GAGTTGCGCA ACCTCGTCGA GCGCGCGGCG
ATTCTGTGCG ACCGCGAGTG GCTCGACGCG ACGGATTTCC CGGAACTCCT CGGCCGCACC
GAACCCGGCT CACCGCAAGT CGGCGAATTC GTCACGCTCG AAGCGCTGAT CGAGGCGCAC
ATCCGGCAGG TGACCGCCCG CGCCGAGAGC TACGAACAGG CGGCGCGCAT CCTGGGCATC
GACAAGTCGA CGCTCTACCG CTGGCGGAAA CGCTTCGAGA ACTTCGATCC GACGAACGTC
GAGGCGTTCG TCGGCTGA
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| Protein sequence | MKLVLIGSES QNRRLVSLGL HRRGDETCQL TRRAELARLP ALREWQVVLL DWDLRTDGAA
ELLRELHERD PELPVVAIVT NPSAAAQART AGATETVFKP INIDEGRALL QRVARAAKPA
ASAAEPAGDT RFITQSAAME QVLAMAWRVA PTSASVLLLG ENGTGKSMLA RAVHEHSTRA
NGPFINVNCP CLQPQLLESE LFGHVRGAFT GAVSDAVGKV AAAEGGTLFL DEVGELPPEI
QAKLLRLLQE RCYERLGEAQ TRRADIRVIA ATNRDLRQRV AAGAFREDLY YRLNVITIEM
PSLRGRPEDI VPLAEHFLET LSQSAGGPRR RLTLAAREAL VAHSWPGNLR ELRNLVERAA
ILCDREWLDA TDFPELLGRT EPGSPQVGEF VTLEALIEAH IRQVTARAES YEQAARILGI
DKSTLYRWRK RFENFDPTNV EAFVG
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