| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0032 |
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| Symbol | |
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| ID | 6204999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 41749 |
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| End bp | 43743 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641689654 |
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| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
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| Protein accession | YP_001816924 |
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| Protein GI | 182411858 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.468114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00512066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTCGCGC AGAGCACCGT GCCGGCGCTG AAATCGGGCG TCACCTTTTC CGCCCGCACG
TTGGTCGCTG GCGAAGCGCC CATTTCCCTT CACCTTTCCG ACTACTTCGA GGTACCGGGC
GTCACCGGCA CGGTCGTGCA GTTCGACACC ATTCGCGGCA AATTCAATGC CGAGTTGTTG
TCAGCTGACG CCCCGAAAAC CGTCACGAAT TTCCTCAACT ACACGCTGCG CGGCGCTTAC
ACCAACAGTC TCGTGCACCG CTCGGTGCCG GGATTTGTGA TCCAAGGAGG TGGCTATTGG
CTGAACAGCT CCACCATCAC GCCGATTACC ACCGATCCGG CGGTTCAAAA CGAGTTCAAG
CTATCAAACG TTCGCGGAAC ACTCGCGATG GCGAAAACCG CGCAGGGCCC GGATACGGCC
ACCTCGCAAT GGTTCATCAA TCTCGCCGAC AACCACGCGG CGCTTGATTC CACCAACGGT
GGCTACACGG TCTTCGGCCG CGTGCTGGGC ACCGGCATGA CGATCGCGGA CTCGATTGCC
GCCATTCCCG TTTACGATGC GAGCAGCCAA CTCGGCAGCG CTTTCAAGGA GATGCCGCTC
ACCGGCTCGA CCTTGGTGAC AGCCAATCTC GTGATGGTCC ACAGCGTACG GGCCGTGCCT
GTCTATCCCA ACCTGGCAGA CGCAGGCGCC GTGCTCACGT TCTCCGCGCT CAGCGCCAAT
ACCGGCGTCG TCACCGCGGA GGTGGTGGGG TCCACGCTCA CCCTGCGGCC GGTGGCTGCG
GGCAGCACGA CCGTGACGGT GGCCGCCACG GATACCAACG GCAACCAAGC GCCGGGCCAA
ACCAGCTTTG CGGTGACCGT CACGACCACG CCCGTGTTCA CCACGCAACC CGCCGCTCGT
TCAATCGACG CGGGCGCTTC CGCGACCCTC ACGGTCGCCG CCACGGCGGG CGCGACGCTG
CAATGGTATC GCAACGGGCG CGCGCTTTCC GGTGCTACAA CAGAAGGCGT TTCCATCACG
TCCATGGAAC CCCGATGGGC TGGGCTTTAC ACGGTCGTCG CTCGGTCGGG CAATGCCGCG
GCTCGCACGA CTCCAGCGAT TGTTGGACTC CTGCTCAACG AGGGTAAAGT TTTCGGCACC
GCCGAGGAGG TGGGCTCCAA CATTCCCCAT CCGAACGGCA ACATTTTCGA TCAGGTGCTG
CTGCAAAAGT CCGCGACGAC AGGAGCTTCG GCCGCATCGA TCCGAGCTGA CTACGCGCAG
AACCAAATCA CCCGGACTTC CTTCATCGGA CTAAACGACG ACATCGTGCA GGTCGAGTAT
AGCGGGCCTG GCACGCTCTC GATCCTGATG GATTCAGTCT CTGGGCCTGC TACGCCGACC
AAATACAATC AGCCGGACAC ACAATATGTT CGGGGCCACG CGAGTATCGT GATCACCGGA
GCGAATGAAA ACTCACACGT CTCGGTCTTC ACCGTCGGCA AGCTGACCGC TTATGACCCC
ACCGGAGCCT TCGACATTAG CAAACCGATC AGCTCGACCA ACAATCCTGC CAACAACGGT
AACCCAATCT TTAAATCCGG TGAGAGCTAC GATGGCATGG CGATCATCGC ACGGATCTCG
ATCCGTAGTA CGGATGGCAA ATTCGGCAGC ATCCGGACGG CCGACACGCT GTTCTATGAT
GACGCAGGCT ACGTCGGCAT TTACGCACCA GGAGTCACGG TCGTTGATCG GGTTGTCATT
GGCGACATCA ACGCAGACGG GGGAGCAACG CCCGCGATCA TCCTGGGGGG CTCGCCTGCG
GAGCTAACCT TGGTGACCGG CGGCGACCTT CACCAGAACA ACGGTCAACC GATCCAGATC
AGTGGGATCA CGAAATTGAA ATTCCAAGCG GGCACGGACT CCCATGGCAA TACCCTGCCT
GCCCAGAAAA ACCAGGGCAT CCTCCACCAG AACGGCGTGA ACGTCACCGC GCAGATCGCG
GTGAACCCAC AGTAA
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| Protein sequence | MLAQSTVPAL KSGVTFSART LVAGEAPISL HLSDYFEVPG VTGTVVQFDT IRGKFNAELL
SADAPKTVTN FLNYTLRGAY TNSLVHRSVP GFVIQGGGYW LNSSTITPIT TDPAVQNEFK
LSNVRGTLAM AKTAQGPDTA TSQWFINLAD NHAALDSTNG GYTVFGRVLG TGMTIADSIA
AIPVYDASSQ LGSAFKEMPL TGSTLVTANL VMVHSVRAVP VYPNLADAGA VLTFSALSAN
TGVVTAEVVG STLTLRPVAA GSTTVTVAAT DTNGNQAPGQ TSFAVTVTTT PVFTTQPAAR
SIDAGASATL TVAATAGATL QWYRNGRALS GATTEGVSIT SMEPRWAGLY TVVARSGNAA
ARTTPAIVGL LLNEGKVFGT AEEVGSNIPH PNGNIFDQVL LQKSATTGAS AASIRADYAQ
NQITRTSFIG LNDDIVQVEY SGPGTLSILM DSVSGPATPT KYNQPDTQYV RGHASIVITG
ANENSHVSVF TVGKLTAYDP TGAFDISKPI SSTNNPANNG NPIFKSGESY DGMAIIARIS
IRSTDGKFGS IRTADTLFYD DAGYVGIYAP GVTVVDRVVI GDINADGGAT PAIILGGSPA
ELTLVTGGDL HQNNGQPIQI SGITKLKFQA GTDSHGNTLP AQKNQGILHQ NGVNVTAQIA
VNPQ
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