| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0027 |
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| Symbol | |
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| ID | 6206550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 32742 |
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| End bp | 34388 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689649 |
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| Product | cytochrome c class I |
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| Protein accession | YP_001816919 |
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| Protein GI | 182411853 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants
[COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.16509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0410464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACATT TTCGTTACGG ACTCGCGCTC TCCCTTCTTT CGGTCGCGGC GCACGCCGCC
AGCATGCCCA ATCCCGACGC CGACAACGGC GGACTCACGC TCCCGTCCGG CTTTCGTGGG
TTGATCGTCG CGGATGATCT CATGGCCGGC CGCGGCACCG GCAACGCTGG CGATGCGCTG
CGGTTCCTGG CGGTGACGCC GGAAGGCGCC GTCTATGCGA AGACCTCGCG CGGCGGCATC
CTCGCGCTGC GCGATGCCGA CGGCGACGGA CGCTTCGAGC AGAAGCAGGA GTTCGGCTCC
GGCGGAGGCA CGGGCATCGC GGTGCACGAC GGTTGGCTCT ACCACTCGAC CGACAGCGCA
GTCTATCGCT ACAAACTTGA GCCCGGACAA CTCGTGCCGA CAGGCGAGCC GCAGCTGATC
GTGAGCGGAC TGCCGAACGA ATTCTCGCAT ACGTCGAAGG CCTTCGCGTT CGACAGCCAG
GGCCGGCTGC TGGTCGAAAC GGGTTCGCCG CACAACGTCT ACAGCGATGG CGACCGGCAG
CTCGGTGCAA AGGGCAAGGA TCCAACTGAA TATCTGAAGA CGCACGGCGG ATTCTGGCGG
TTCGATCCGG AGAAACAGAA CCAGAAGCAG TCCGACGGAT TTCATTTCTC GACCGGCCAC
CGGCATTCGC TGGCGATCGC GTGGCAGCCG GTGGCCAAGG AGTTTTTCAT GGTCATGATG
GGCCGCGACG GACTGAACAC GGTGGCGCCG GATTACTACG ACACACTCGA CAACGCGGAG
CGCGTGGCCG AGGAGATGCA CCGGTTGAAG GAAGGCGTGA ACCTCGGCTG GCCATTCACG
TATTGGGACC CCTACAAGAA GGCGCGGATG ATCAATCCGG AGTTCGGCGG CGACGGGCGC
AAGCGCGCGG AGGTGGGAAA ATACGACGAG CCGCTGATCG CGTTTCCGGC GCACTGGGCG
CCGCTGCAGA TGCAGTTCTA CACCGGCACG CAGTTTCCCG AGCGCTATCG CGGCGGGGCG
TTCGTGGCGT TTCACGGCTC GTGGAATCGC GCGCCGCTGC CGCAGGACGG GTTCAACGTT
TGCTTCGTGC CGTTCGACGC GAAAGGTGCG CCGCTGGGAT CGTATGAAGT GTTTGCAGCC
AACGCGGGCC CGCAGCGGTT CCGGATGGGC GGCGTGGCGG TTGGACCGGA CGGTTCACTC
TACATCAGCG AGACTGATCG CGGTCGGATC TGGCGGATCA TGTATGTTGG CGAGCAGGCG
GGGACGGCTG CACCGGCGGC CACGGTCGCG GCGGGCGCGG TGAAACCGGC GCCGGCGTCG
GCGAACGCGG GGGGCCGGCA GCTCTACGAA CAGCTGTGCG CGTCCTGTCA CATGCCTGAT
GGCTCGGGCG CGGGGGCGCA GCAGCCGCCA CTGGCCGGCA GCAAGGTGGT CAGTGGCAAT
CCCGAGCAGC TGATCGCGGT CGTGCTGCAC GGGCCGGCGG AAGTGCTGCC GCCGGACCGG
CCGAAATATG GCAACGTGAT GCCGTCCTTC GCGGTACTGG GCAACCAGCA GGTGGCGGAT
CTGCTTTCGT ATGTGCGCGA GGTCTTCGGC AACCGTGGGA CGCCGGTGAC CCCAGCGAAC
GTCGAGGCGA TTCGCCAGCA GCGGTGA
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| Protein sequence | MQHFRYGLAL SLLSVAAHAA SMPNPDADNG GLTLPSGFRG LIVADDLMAG RGTGNAGDAL
RFLAVTPEGA VYAKTSRGGI LALRDADGDG RFEQKQEFGS GGGTGIAVHD GWLYHSTDSA
VYRYKLEPGQ LVPTGEPQLI VSGLPNEFSH TSKAFAFDSQ GRLLVETGSP HNVYSDGDRQ
LGAKGKDPTE YLKTHGGFWR FDPEKQNQKQ SDGFHFSTGH RHSLAIAWQP VAKEFFMVMM
GRDGLNTVAP DYYDTLDNAE RVAEEMHRLK EGVNLGWPFT YWDPYKKARM INPEFGGDGR
KRAEVGKYDE PLIAFPAHWA PLQMQFYTGT QFPERYRGGA FVAFHGSWNR APLPQDGFNV
CFVPFDAKGA PLGSYEVFAA NAGPQRFRMG GVAVGPDGSL YISETDRGRI WRIMYVGEQA
GTAAPAATVA AGAVKPAPAS ANAGGRQLYE QLCASCHMPD GSGAGAQQPP LAGSKVVSGN
PEQLIAVVLH GPAEVLPPDR PKYGNVMPSF AVLGNQQVAD LLSYVREVFG NRGTPVTPAN
VEAIRQQR
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