| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0021 |
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| Symbol | |
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| ID | 6204446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 24092 |
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| End bp | 26677 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689642 |
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| Product | permease |
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| Protein accession | YP_001816913 |
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| Protein GI | 182411847 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0686049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.167334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCGT TCCTCCAAGA CCTACGTTTC TCGCTGCGGC TGCTCGCCCG CACCCCGGCC
TTCACCGTCG CCGCGATCGC CGTGCTCGCG CTCGGGATCG GCGCCAACAC CGCCATCTTC
AGCCTCGTCC ACCAGCTGAT CTGGAGCCCG CGGCCGTTCG CCGAGCCGGA CCAGATCGTC
CAGCTGTATT CTCAGGACAA AAAGAATCCG CAGAATTTCC GGCTGTTCTC CTACCCGACC
TATCGCGACC TCGCGGCACA GAACGAGGTG TTCACCGACG TGCTCGCGCA CAATCTCGCC
ATGGTCGGCA TCGGCGAGGG CGCCGGCGCG CGGCGCAGTT TCGCCGCGCT CGTTAGCTCG
AACTACTTCT CCGTCCTCGG CGTGGCGCTG CCGCAGGGGC GGGCGTTCAC GCCGGAGGAG
GAACGACCGT CGAGCAACAT TCCGGTGGTG ATCGCGAGCC ATCTTTACTG GAAGCACACG
GGCTTCGATC CCGCGCTTGT CGGCAAGACC ATCCGGGTGA ACGAACGGTT GTTCACCGTC
GTGGGCATTA CGCCCGAGCA CTTCTCCGGC ACGATGATGC TCCTCGGCGC CGAGCTGTAT
TTCCCGCTCG GCATGTATGA CTCGCTCGCG GGCGATTTCA TGAAGGGCCA TTCGGACCGG
ACGCTCGAGC GACGCGATGC GAACCAACTC TTCCTGCTCG GCCGGCTGAA GCCGGGACTG
ACGGTCGCCA CCGCCCAGGC GTCGCTGCAG ATGCTCGCGA CGAGCCTGGA GCAAAGTTAT
CCGGCCGAGC AGAAGGACCA AACGCTGCTG GTCGGAGCCC TGCCGCGCAA CAGCACCAGC
GTGGCACCGC AGCGCGAAAA CCAGCTCACG GTGATCGGAA TGTTGCTGGT CGGCATGGCC
GGCATCGTGC TCCTGATCGC GTGTCTCAAC CTCGCCAATC TGCTGCTCGC GCGTGGCCAC
GCCCGGCGGA AGGAATTCGC GATCCGACTC GCGCTCGGCG GCGGCCGGCG GCGGCTCGTG
CGCCAGTTGC TCACGGAAGG CCTGGTGCTT GCGCTGCTCG GTGGCGCGGC CGGGCTGGTG
CTCGCGATCT GGGGCAACGG GCTGCTGCTC AACTCCGTCG CGAGCAAGAT GCCGCTGGCG
CTGTTCTTCG AGGATAGTGT TCAACCGGCA GTGCTCGCAG CGACGCTGGG GTTCTGCGCG
CTGGCGGTAT TCGGGTTCGC GCTCGGCCCG GCGTTGCGGC TGACGCGCAC CACCACGATC
GATGATCTCA AGGAACAGGC CGGCGAGGAT CCGGCGACGC ATCGCCGCCG ACTGCGCTGG
CTGCCGCGGC ATCCGCTGGT GGTGGCGCAG CTCGCGCTCT CGCTTGGGCT GCTGTGCACC
GCCGCGCTTT TTGTCCGCGG CGCACTCAAG GCAGGCAGCA TCGAAACCGG TTTCAAGGCG
GACGAGACGC TGCTCGTCGA GGTCGACGCG GCGCTCGGCG GCTACGACCA GACGCGGGCG
CTGCAGGCTT ACCGCGCCGT GAATGAGCGG CTCGCCGCGC TGCCCGGCGT GCAGGCTGCG
AGCATCGGCA CCGTCGTACC GTTCGGGATG ATCAGCCTGG GCAAAGATGT CCGTCGCGCC
GGGCTTCGAC CGGAACCTGG CGCGCATCCG GCCACCGCCG CTGAAGGCCG GAGTTACTCC
GCCAACTGGA CCAGCGTCGG CGCCGGCTAT TTTTCCGCGA TGGGACTGCC GCTGCTGCGC
GGCCGCAGCT TCAGCGCAAC GGAAACGGAC GCGCCGGGCG CACCCCTGGT CGCCGTCATC
GACGAAAACC TCGCGCGACA ACTTTATCCG GACGGCGAGG CACTGGGACA GCGGATCGAA
TTCGGTCGCG GCGACATCGA ACCACCTTCC GCCTCGGAGC AGCCGGCGGG CGATGCGCGC
ACCCCGAAGA CGATGGAGAT CGTCGGCATC GTGCCGGCGA CGCGCTGGGA TTTGTTCGAC
GCCGCCGAGG CCGGCGCCGT CTACGTGCCG TTTGCGCAAG GATTCCAGAG CAATGCGTTT
TTCCACGTGC GCGCAGCCAC TGCCTCGCCG GAGGCACGCC TTGCGCTGGT CGATGCGATT
CGCCGCGAAA TCCGCGCCGC CGCTCCCGCG GTGCCATCGT TCACCGCGCG AACCTTCCGC
CAGCATCTCG AGGCCAGTCT GCAGCTGTGG GTCGTCCGCA CCGGCGCAAC GCTGTTCGGT
CTGTTCGGCG CGCTCGCGCT CGTACTCGCC GCCGTGGGCA TCTACGGCGT GAAGAGCTAC
GCGGTGACGC GGCGCACGCG CGAGATCGGC ATTCGCGTCG CGCTCGGCGC CGCGCCGGCG
ACCGTACGCT GGATGATTCT GCGCGAGGGG CTTGTCACCA CGCTGGCGGG TCTCGCGTGC
GGGTTGCTGC TCGCGCTGGC GCTGGGCGCG GCGTGCGCCG GGATCCTTTA TCAGGTCAGC
GCGGTGGATC CGTTCGCGTT CACCTTCGCG CCGCTGGTGC TGGCTCTCGC CGCGTTGCTC
GCTTGCTGGC TGCCGGCCCG GCGCGCCACG CGCGTCAGCC CGATGACCGC GCTGCGGACG
GAATGA
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| Protein sequence | MPSFLQDLRF SLRLLARTPA FTVAAIAVLA LGIGANTAIF SLVHQLIWSP RPFAEPDQIV
QLYSQDKKNP QNFRLFSYPT YRDLAAQNEV FTDVLAHNLA MVGIGEGAGA RRSFAALVSS
NYFSVLGVAL PQGRAFTPEE ERPSSNIPVV IASHLYWKHT GFDPALVGKT IRVNERLFTV
VGITPEHFSG TMMLLGAELY FPLGMYDSLA GDFMKGHSDR TLERRDANQL FLLGRLKPGL
TVATAQASLQ MLATSLEQSY PAEQKDQTLL VGALPRNSTS VAPQRENQLT VIGMLLVGMA
GIVLLIACLN LANLLLARGH ARRKEFAIRL ALGGGRRRLV RQLLTEGLVL ALLGGAAGLV
LAIWGNGLLL NSVASKMPLA LFFEDSVQPA VLAATLGFCA LAVFGFALGP ALRLTRTTTI
DDLKEQAGED PATHRRRLRW LPRHPLVVAQ LALSLGLLCT AALFVRGALK AGSIETGFKA
DETLLVEVDA ALGGYDQTRA LQAYRAVNER LAALPGVQAA SIGTVVPFGM ISLGKDVRRA
GLRPEPGAHP ATAAEGRSYS ANWTSVGAGY FSAMGLPLLR GRSFSATETD APGAPLVAVI
DENLARQLYP DGEALGQRIE FGRGDIEPPS ASEQPAGDAR TPKTMEIVGI VPATRWDLFD
AAEAGAVYVP FAQGFQSNAF FHVRAATASP EARLALVDAI RREIRAAAPA VPSFTARTFR
QHLEASLQLW VVRTGATLFG LFGALALVLA AVGIYGVKSY AVTRRTREIG IRVALGAAPA
TVRWMILREG LVTTLAGLAC GLLLALALGA ACAGILYQVS AVDPFAFTFA PLVLALAALL
ACWLPARRAT RVSPMTALRT E
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