| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6478 |
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| Symbol | |
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| ID | 6182572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1101352 |
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| End bp | 1102185 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689597 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001816456 |
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| Protein GI | 172065744 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0193628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG GTAACGTCAT GCTCATCACC GGCGTCAGCA GCGGCTTCGG CCGCGCGCTC
GCGCAGGAGG CGCTGGCCGC GGGTCGTACG GTGGTCGGCA CCGTCAGAAG TGAAGCGGCG
AGGCAGGCGT TCGAAGCGCT GTCGCCGCAT GCGGCCATCG GGCGCGTGCT CGACGTGACC
GACTTCGAGC GCATCGACGG CGTCGTCGCG GATATCGAGG CGAGCGTCGG CCCCGTCGAC
GTGCTGGTGA ACAACGCCGG CTACGGGCAC GAAGGCATCC TGGAGGAGTC GCCGCTGTCG
GAGATGCGCC GGCAGTTCGA CGTGAACGTG TTCGGCGCGG TCGCGATGAT GAAGGCCGTC
GTGCCGTTCA TGCGAGAACG CCGGCGCGGC CGCATTCTGA ACATCACGTC GATGGGCGGC
CACATCACGA TGCCGGGCAT CGCGTATTAC TGCGGCAGCA AGTTCGCGCT GGAAGGGATT
TCGGAAACGC TCGGCAAGGA GTTGGAGCCG TTCGGCATCG CGGTGACCGC CGTCGCGCCG
GGCTCGTTCC GCACCGACTG GGCCGGCCGT TCGATGACGC GCACGCCGCG CTCGATCGCC
GACTACGACG CGATCTTTGA TCCGATCCGC CAGGCGCGCG AGGAAAAAAG CGGCCGGCAA
TTGGGCGATC CCGCCAAGGC GGCGCGCGCG ATGCTCGCGG TCATTGAGGC GGACCGTCCG
CCGGCCCATC TGTTGCTGGG CAGCGATGCG CTGCGCCTCG TGCGCGCCAA ATGGGCGGCG
CTGGAAGACG AGATGCGCAC GTGGGAGGCA GTGACCGTGT CGACGGACGG TTGA
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| Protein sequence | MASGNVMLIT GVSSGFGRAL AQEALAAGRT VVGTVRSEAA RQAFEALSPH AAIGRVLDVT
DFERIDGVVA DIEASVGPVD VLVNNAGYGH EGILEESPLS EMRRQFDVNV FGAVAMMKAV
VPFMRERRRG RILNITSMGG HITMPGIAYY CGSKFALEGI SETLGKELEP FGIAVTAVAP
GSFRTDWAGR SMTRTPRSIA DYDAIFDPIR QAREEKSGRQ LGDPAKAARA MLAVIEADRP
PAHLLLGSDA LRLVRAKWAA LEDEMRTWEA VTVSTDG
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