| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6453 |
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| Symbol | |
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| ID | 6182292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1069032 |
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| End bp | 1070459 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641689572 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001816431 |
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| Protein GI | 172065719 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.610703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCT ACGAAAAACT CGCGGACGAC ATCGAGCGCC TGATTCGCCA GGGCGTGTAC
CGGCACGGCG ATCGGATTCC GTCGGTGCGG CAGGCGAGCC AGCAGCACCG GATCAGCATC
ACGACCGTGC TGCATGCATA TCTGCTGCTC GAAAGCCGCG GGCTGCTGGA AAGCCGCCCG
CAGTCCGGCT ACTTCGTGAA CCTGCGCCGC GACGACAACC ACGCGCCGGT GCGCGAGCTG
CGGCCGTCGA AGCCGATCGC GATCTCGTCG TCGGTCGACA TGAGCCGGCT CGTGCTGTCG
ACGCTGCGCT CGATCGGCAC CGATGACGCC GTGCCGCTCG GTTCGCCGTA TCCGGACCCG
AGCCTGTTTC CGTTCGAGAA GCTGAACCGC TATGCGTATG CCGCCGGCCG CGACAAGTCG
CTGTGGGGCG TGACGGACGG GCTGCCGCCC GGCCATCCGC GGCTGATCCG GCAAATCGCG
CGACGCTATC TGGAAAACGG GATGTCGGTC GATCCGAACG AGATCATCGT GACGGTCGGC
GCGACGGAGG CGATCAATCT GTGCCTGCAG GCGGTTGCGA AACCGGGCGA CACGATCGCG
GTGGAGTCGC CGACGTTCTA CGCGATGCTG CACGCGATCG AGCGGATGGG GATGAAGGCG
ATCGAGGTCG CGACGCACCC GGAGTACGGG ATCGACATCG CGGCGCTGGC GGCCATTGCG
AAGTCGCAGC CGATCGCCGC GTGCATGGTG ATGCCGAATT TCCAGAACCC GCTCGGCTTC
CAGATGCCCG ACGAGCGCAA GCGCGAACTG GTTGAGTTCG CAACGAAAGC CGACATGCCG
ATCATCGAGA ATGGCGTGTA CAACGAACTG TATTTCGGCG AGTCGCATCC GAGCGCGCTG
AAGTCCTACG ACCGCACCGG GATCGTACTG CACTGCTCAT CGTTCTCGAA GAGCCTGACG
GCCGCCTACC GGATCGGCTG GGCGTTGCCG GGGCGCTATC GGGATCAGGT CGAGAAGCTG
AAGTTCCTGA ACACGCTGGC GACGCCGTCG CTGCCGCAGC TCGCGATCGC CGAGTTTCTC
GAGCGCGACG GCTACGAGCA TCACCTGCGG CGCTTGCGCA AGGCGTATGC GCAGCAGGCG
AACCTGATGC GCGCGATGGT GTCGCGGTTC TTCCCGGAAG GTACGCGCAT CTCGAGCCCG
GCGGGCGGTT ACGTGTTGTG GGTCGAGCTG CCGGCACAGG TCGACGCGAT GCGCCTGTAC
CAGCTCGCGC TGGAGCAGGG CATCACGATC GGGCCCGGCT ACATGTTCTC GATCACCGAA
AACTACCGGA ACTTCATCCG GCTGAACTAC AGCAGCCCGT GGTCGCCGGA GATCGAGCAG
GCGGTGATCG CAGTCGGCAA GCTCGCGGCA TCGTGCATGC AGTCGTGA
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| Protein sequence | MKLYEKLADD IERLIRQGVY RHGDRIPSVR QASQQHRISI TTVLHAYLLL ESRGLLESRP
QSGYFVNLRR DDNHAPVREL RPSKPIAISS SVDMSRLVLS TLRSIGTDDA VPLGSPYPDP
SLFPFEKLNR YAYAAGRDKS LWGVTDGLPP GHPRLIRQIA RRYLENGMSV DPNEIIVTVG
ATEAINLCLQ AVAKPGDTIA VESPTFYAML HAIERMGMKA IEVATHPEYG IDIAALAAIA
KSQPIAACMV MPNFQNPLGF QMPDERKREL VEFATKADMP IIENGVYNEL YFGESHPSAL
KSYDRTGIVL HCSSFSKSLT AAYRIGWALP GRYRDQVEKL KFLNTLATPS LPQLAIAEFL
ERDGYEHHLR RLRKAYAQQA NLMRAMVSRF FPEGTRISSP AGGYVLWVEL PAQVDAMRLY
QLALEQGITI GPGYMFSITE NYRNFIRLNY SSPWSPEIEQ AVIAVGKLAA SCMQS
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