Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6421 |
Symbol | |
ID | 6182232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 1031304 |
End bp | 1032476 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641689544 |
Product | acetylornithine deacetylase |
Protein accession | YP_001816403 |
Protein GI | 172065691 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.501182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.657059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACA CGTCGAGCCG CGCGTTGCTC GCGCGGCTGA TCGGCTTCGC GACGGTCAGC CGCGATTCGA ACCTCGCGAT GATCGACTTC ATCCGCGACT ACCTCGACGG CTTCGGCGTG TCGAGCGAGC TGTTCTACAA CGCGGAGCGC ACGAAGGCGA GCCTGTACGC GACGATCGGA CCGCGCGATC GCGGCGGCAT CGCGCTGTCG GGCCATACCG ACGTGGTGCC GGTCGACGGC CAAGCGTGGA CGCTCGAGCC GTTCCGGCTG ACCGAGCGCG ACGGCCGGCT GTACGGGCGC GGCACGGCCG ACATGAAAGG CTTCATCGCG TCGGTGCTCG CGGCCGTGCC GGCATTCGTG TCACGGCCGT TGAACCTGCC CGTGCACCTC GCGTTCTCGT ACGACGAGGA AGTCGGTTGT CTCGGCGTGC GGCCGATGCT CGACGCACTG GCGACGCGCG AGCACCGGCC GCGCCTGTGC GTGATCGGCG AGCCGACCGA ACTGAAGCCG GTGCTCGGTC ACAAGGGCAA GCTCGCGATG CGCTGTCACG TGAAGGGCGC CGCGTGCCAC TCGGCGTACG CGCCGCTAGG CGTCAACGCG ATCGACTACG CGGCGAAGCT GATCGGCCGC CTCGGCGAGA TCGGCGCGTC GCTCGCGCGG CCGGAGCATC ACGACAGCCG CTTCGATCCG CCGTTCTCGA CCGTGCAGAC CGGATTGATC AAGGGTGGCC GCGCGCTGAA CATCGTGCCG GCCGAATGCG AGTTCGATTT CGAGGTGCGC GCGCTGCCGG CGTTCGATGC GCACGACGTG CCGAGGAAGC TGCAGGATTA TGCGGTGTCC GAACTGTTGC CGGCGATGCG CGCGGTGCAG CCCGACACCG ACATCCGTCT GCAGCCGCTC GGCGCGTATC CGGGGCTCGC GACTTCGCCG GACAGCGAAG CCGCGCGGCT GCTCGCGATG CTGAGCGGCT CCGACGCGTT CGGCACCGTC GCATTCGGCA CCGAGGGCGG GCTGTTCGGG CAGGCCGGCA TTCCGACCGT GGTATGCGGG CCGGGCAGCA TGGACCAGGG GCACAAGCCC GACGAGTTCG TCACGCTCGA ACAGCTGCAC GGCTGCGACG CGATGCTCGG CCGTCTCGCG ACGTATCTCG GTTCGGCCGG TTGCTTGGAC TGA
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Protein sequence | MSDTSSRALL ARLIGFATVS RDSNLAMIDF IRDYLDGFGV SSELFYNAER TKASLYATIG PRDRGGIALS GHTDVVPVDG QAWTLEPFRL TERDGRLYGR GTADMKGFIA SVLAAVPAFV SRPLNLPVHL AFSYDEEVGC LGVRPMLDAL ATREHRPRLC VIGEPTELKP VLGHKGKLAM RCHVKGAACH SAYAPLGVNA IDYAAKLIGR LGEIGASLAR PEHHDSRFDP PFSTVQTGLI KGGRALNIVP AECEFDFEVR ALPAFDAHDV PRKLQDYAVS ELLPAMRAVQ PDTDIRLQPL GAYPGLATSP DSEAARLLAM LSGSDAFGTV AFGTEGGLFG QAGIPTVVCG PGSMDQGHKP DEFVTLEQLH GCDAMLGRLA TYLGSAGCLD
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