Gene BamMC406_6414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6414 
Symbol 
ID6182225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp1020499 
End bp1021548 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content69% 
IMG OID641689537 
ProductDyp-type peroxidase family protein 
Protein accessionYP_001816396 
Protein GI172065684 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2837] Predicted iron-dependent peroxidase 
TIGRFAM ID[TIGR01413] Dyp-type peroxidase family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.285799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.19542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCC GTCCCCCGCT TTCCCAGGCC GTTCACGAGC CGATCACGCG CAGCGCGATC 
TTCCTCGTCG CAACCGTGAA CCCCGGCGCC GAGCGCGCCG ACACGATCCG CGCGTGGTGC
GGCGACATCG CCGCGCTCGT GCGCTCGGTC GGCAAGCGCG TGCCGGGCGG CAACCTGTCC
TGCGTATGCG GCTTCGGCTC CGACGCGTGG GACGCGCTGT TCGGCGATCC GCGTCCCGCG
TCGCTGCATC CGTTCCGCGA ATTCGGCGCC GGCCAGCGCG TCGCGATCGC GACGCCGGGC
GACATCCTGC TGCACATTCG CGCCGACGCG ATGGACCTGT GCTTCGAGCT CGCGACCCAG
TTGCTCGCCG CGCTCGGCGA CGCGGTCACG GTCGTCGACG AGGTGCACGG CTTTCGCAAC
TTCGACCAAC GCGCGATGAT CGGCTTCGTC GACGGCACCG AGAACCCGGA AGGCCGCGAC
GCGGTCGACT TCACGGTGAT CGGCGACGAG GACGCCGAAT TCGCGGGCGG CAGCTACGTG
CTCGTGCAGA AGTACCTGCA CGACATGGCC GGCTGGAACG CGCTCTCGGT CGAGACGCAG
GAGCGCATCA TCGGCCGCAC CAAGCTGTCC GACATCGAGC TCGCGCCGGA CGTGAAGCCG
TCGTGCTCGC ACAGCTCGCT GACCACGCTC GACGAAAACG GCCAGGAAGT GAAGATCCTG
CGCGACAACA TGCCGTTCGG GCGCCCCGGT TCCGGCGAAT TCGGCACCTA TTTCATCGGC
TACGCGCGTT CGCCGGCGCC GATCGAGCAG ATGCTCGAGA ACATGTTCGT CGGCCGCCCG
CCCGGCAACT ACGACCGGCT GCTCGACTTC AGCCGCGCGG TCACCGGCTC GCTGTTCTTC
GTGCCGTCGG CCGACCTGCT CGAAGCGCTC GCCGATCGCG CCGCACCGGC CGACACCGAC
GCCGCGCAGC CCGCACCCGC ATCGCCCGAG CCGCGTCGTG ACGGCTCGCT GAACATCGGA
TCGCTGAAAG GAGCCAAAGC CTATGAATAA
 
Protein sequence
MQTRPPLSQA VHEPITRSAI FLVATVNPGA ERADTIRAWC GDIAALVRSV GKRVPGGNLS 
CVCGFGSDAW DALFGDPRPA SLHPFREFGA GQRVAIATPG DILLHIRADA MDLCFELATQ
LLAALGDAVT VVDEVHGFRN FDQRAMIGFV DGTENPEGRD AVDFTVIGDE DAEFAGGSYV
LVQKYLHDMA GWNALSVETQ ERIIGRTKLS DIELAPDVKP SCSHSSLTTL DENGQEVKIL
RDNMPFGRPG SGEFGTYFIG YARSPAPIEQ MLENMFVGRP PGNYDRLLDF SRAVTGSLFF
VPSADLLEAL ADRAAPADTD AAQPAPASPE PRRDGSLNIG SLKGAKAYE