Gene BamMC406_6407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6407 
Symbol 
ID6182552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp1014184 
End bp1014516 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content70% 
IMG OID641689531 
Producthypothetical protein 
Protein accessionYP_001816390 
Protein GI172065678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00903722 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.080212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CGAATACTCG CTACGACAAC TGCATGGCCG CGTGCGACGC GTGCGCGCAC 
GCCTGTGACG CGTGCATGGC CGCGTGCCTG GCAGAGCCCG ACGCACACAA GCTGGCCGAC
TGCATCGCGC TGGACATCGA ATGCGCGCAG CTGTGCCGCT TCGCGTCGGG CGTGATGGCG
CGCGGCAGCG TGGTCGCGCC GCGCGTGTGT GCGCTGTGCG CGCAGGTCTG CGAGCTGTGC
GCGGTCGAAT GCCTGCGGCA TCTGCACGAA CATTGCCGGC GCTGCGCGCT GGCGTGCGAC
GCGTGCGCGG CGATGTGCCG CGCGATGGCT TGA
 
Protein sequence
MSDTNTRYDN CMAACDACAH ACDACMAACL AEPDAHKLAD CIALDIECAQ LCRFASGVMA 
RGSVVAPRVC ALCAQVCELC AVECLRHLHE HCRRCALACD ACAAMCRAMA