| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6401 |
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| Symbol | |
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| ID | 6182546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1006476 |
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| End bp | 1007225 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689525 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001816384 |
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| Protein GI | 172065672 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.476786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.058074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCGA CTCACGATCC CGCCCGCCAA TCTCTTGCCG GACGCACCGC GCTCGTGACG
GGCGGCGGCC GCGGCCTCGG CGAGGCCATC TGCGAGGAGC TGGCGCAACA CGGCGCGCAC
GTGATCGTCG CCGATCTCGA CGGCGACCGC GCGGCGGCCG TCGCGCAACG ACTCGAGCGG
CATGGCGGCC AGGCGGTCGG ACGGCCGCTC GACGTGCGCG ACGAAGCGTC GGTGCTGCAG
GTGGTGCACG ACGCGCGCGA GGCGCTCGGC GATCTCGACG TGATCGTCAA CAACGCGGCG
ATCGACGTGA CCGCGCCGAT CGACGACGTC AGCGTTGCAG CGTGGCAGCA GGTGATGATG
ACAAACCTGT TCGGCCCGTA CCTGATGTGC CACGCGGCCG TGCCGATGAT GAAGGCGCGC
GGCAGCGGCC ATATCGTCAA CATCGCGTCG ACGGCATCGA AGCGCGCGTG GCCGAATGCA
TCCGCGTATC ACGCGACGAA GTGGGGGCTG CTCGGGCTGT CGCATGCGCT GCATGCGGAG
TTGCGGCCGG CCGGCGTGAG CGTGTCGGCG ATCGTCGCGG GCGGAATGCG TACGCCGTTC
CTGCTCGACC GCTTCCCCGA CATCGACGAG GACACGCTGC AGCCGCCGGA GCACGTCGCG
GCCGCCGTGC GGTTCGTGCT GACGCAGCCG CCCGGCACCG TTGTGCCGGA GCTGATGGTG
CTGCCGATGA AGGAGACGTC ATGGCCCTGA
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| Protein sequence | MNATHDPARQ SLAGRTALVT GGGRGLGEAI CEELAQHGAH VIVADLDGDR AAAVAQRLER
HGGQAVGRPL DVRDEASVLQ VVHDAREALG DLDVIVNNAA IDVTAPIDDV SVAAWQQVMM
TNLFGPYLMC HAAVPMMKAR GSGHIVNIAS TASKRAWPNA SAYHATKWGL LGLSHALHAE
LRPAGVSVSA IVAGGMRTPF LLDRFPDIDE DTLQPPEHVA AAVRFVLTQP PGTVVPELMV
LPMKETSWP
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