Gene BamMC406_6382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6382 
Symbol 
ID6182147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand- 
Start bp986246 
End bp986857 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content70% 
IMG OID641689506 
Producthypothetical protein 
Protein accessionYP_001816365 
Protein GI172065653 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.141353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.501614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC CCAACTGGAC GATCGCGGCG CTCGCCGCGG GCGTGCTCGC CGTGTCGGGA 
CTCGCGCACG CACAGATGCC GAGCGAGCCG CCCGCATCGA ATTCGCATGT GCCGGGCGGC 
GTGATCAACC CGTCGTCGGG CGCCGCCACG GGCGACATGG GCATGGCGAA GGCGCCGCAG 
GGCGGCGACG CGGAATTCAT CGACAAGGCC GCGATGGCCG GCAAGGCCGA GGTGCAGGCG 
AGCCAGCTCG CGTTGAAGCA GGCGCAGTCG GCGGACGTGC GCGCGTTCGC GAAACGCATG 
GTGGCCGATC ACGGCAAGGC GAACGCGAAG CTCACCCAGA TCGCCGCGCG CAAGGGCATG 
AAGCCGCAGG TGGAGCAGAT CTCGGATCCG GACGTCGAGG CGCTGCGCGG CAAGAGCGGC 
CACGACTTCG ACACCGCGTA TGTCGCGGCG GCCGGCCCCG ACGCGCACCG CAAGGCGGTC 
GCGCTGTTCG AAGGCGAGGC GCGCGACGGC AAGGATCCGC AGCTGCGCGC ATTCGCGAAA 
GCCACGCTGC CGACGCTCAA GCATCACCTG AGCATGGCGG AGGCGCTCCA ACGCAAGGTG 
GGCGCGCAGT AA
 
Protein sequence
MKQPNWTIAA LAAGVLAVSG LAHAQMPSEP PASNSHVPGG VINPSSGAAT GDMGMAKAPQ 
GGDAEFIDKA AMAGKAEVQA SQLALKQAQS ADVRAFAKRM VADHGKANAK LTQIAARKGM 
KPQVEQISDP DVEALRGKSG HDFDTAYVAA AGPDAHRKAV ALFEGEARDG KDPQLRAFAK 
ATLPTLKHHL SMAEALQRKV GAQ