| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6322 |
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| Symbol | |
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| ID | 6182626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 922633 |
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| End bp | 924834 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641689448 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001816307 |
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| Protein GI | 172065595 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.529539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.166008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA TGCTGTTCGA CCGCACCGAC ATCGACGCGC TGCTCGCCGG CCGCCATCCG
GACCCGTTCG CGTGTCTCGG CCCGCACGCC GACGCCGGCC GGGTCGTCGT GCGCGCGCTG
CTGCCCGGCG CGCAGCGCGT GCGGGCGGTG ACGCCCGACG GCGACGAACT CGGCGCGCTC
GCGTGCGTCG ACGACGCCGG CTGCTTCGCG GGCACGCTCG CGCACGACGG CCGCTACCGG
CTGGCCATCG ACTGGCCGGA CGCCCGCCAG ATCACCGACG ACGCGTATGC GTTCGGCACG
CTGCTCGACG AGGCCGCGCT CGCGCGTTTC GCGTCCGGCG ACCCGGCCGC CGTGCTCGAC
TGCCTGGGCG CGACGCCCAC GCGCGTCGAC GGCATCGACG GCGTGCGCTT CGCGGTGTGG
GCGCCGAACG CGCAGCGCGT ATCGGTCGTC GGCGACTTCA ACATGTGGGA CGGCCGTCGG
CATCCGATGC GGCTGCGCCG GCCGTGGGGC GTGTGGGAGC TGTTCGTGCC GGGCATCGGC
GCCGGCGAAC ACTACAAGTA CGAGCTGCGC GCGGCCGACG GACACGTGCT GCCGCACAAG
GCCGACCCGT GCGCGCGCGC GACCGAAGCG CCGCCGCGCA CCGCGTCCGT CGTCGCCGAC
ACCGCGGCGC TCGACGCGTT CGCGTGGCAC GACGACGGCT GGCTGCACGC GCGGCCGCCC
GCGGACCGGC GCTTTCGCAT GCCGTGGTCG ATCTACGAGG TGCATCCGGA ATCGTGGCAG
CGCGTGCCCG AGGAGATGGA CCGCAGCGCG ACCTGGGACG AACTCGCCGA GCGGTTGATC
CCGTATGTGC GCGGCATGGG CTTCACACAC GTCGAATTCA TGCCGATTTC CGAATACCCG
TTCGGCGGTT CGTGGGGCTA CCAGCCGCTC GCGCAGTTTG CGCCCTCGGC GCGCTTCGGC
CCGGTCGAGG GATTCGCGCG CTTCGTCGAC CGCGCGCACG CGGCCGGCAT CGGCGTGATC
GTCGACTGGG TGCCCGCGCA CTTCCCGAAC GACGCGCACG GCCTCGCGCA ATTCGACGGC
AGCGCACTGT ACGAGCACGC CGATCCGCGT GAAGGCATGC ACCCGGACTG GAACACCTGC
GTGTTCAATC TCGGACGCAA CGAGGTCGGC GCGTTCCTCA TCGCGTCGGC GCTCGCGTGG
GCGCGCCGTT ATCACGTCGA CGGGATCCGC GTCGATGCGG TCGCGTCGAT GCTGTACCGC
GACTACTCGC GCAACGAAGG CGAATGGGTG CCCAACATCC ACGGCGGGCG CGAGAACCTC
GAATCCGTCG CGTTCCTGCG CACGCTCAAC GACACGCTGC ACGGTGCGCT CGCGCCGCCG
GGCGTCGTCA CCTTCGCGGA GGAATCGACC GCGTGGCCGG GCGTCACGGC GTCGACCGGC
GACGGCGGGC TCGGCTTCGA CTTCAAATGG AACATGGGGT GGATGCACGA CACGCTGTCG
TATGTACGCG AGGATCCGAT CCATCGCCGC TACCATCATG ACCGGATGAC GTTCGGGCTC
GTCTATGCGT TCTCCGAACG ATTCGTGCTG CCGCTGTCGC ACGACGAGGT CGTGCACGGC
AAGGGTTCGC TCGCCGTGAA GATGCCGGGC GACGCGTGGC AGCGGCTCGC GACGCTGCGC
GCGTACTTCG GCTTCATGTG GGCGCATCCG GGCAAGAAGC TGCTGTTCAT GGGCAGCGAA
TTCGCGCAAT GGGCCGAGTT CGCGCACGAT GCGACGCCGC ACTGGGACCT GCTCGACGCA
CCGGCGCATC GCGGCGTGCA GCGGCTCGTG CGCGACCTGA ACCGCACCTA CGCGGCCGAG
CCGGCGCTGC ACGCGCTCGA CTGTCACGCG TCCGGTTTTT TCTGGCTGAT CGGCGACGAT
CGCGACAACA GCGTGTTCGC GTTCGCGCGC CGCGACGATA CCGGGCGCCT CGTCGTCGCG
ATCTGCAACT TCACGCCCGT GCCGCGCCCC GGCTATCGCA TCGGGCTGCC CGCGCCCGGG
CACTGGCGCG AACTGATGAA CACCGATGCC GCCGTGTATG GCGGCACGAA TGCCGGCAAC
GACGGCGCCG TGTGGACGGA GGACGTGCCG TCGCACGGCC AGTCGTGGTC GGCCACCTTG
CGCCTGCCGC CGCTCGCGAC CCTATGGCTG AGCCCGGCCT GA
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| Protein sequence | MTDMLFDRTD IDALLAGRHP DPFACLGPHA DAGRVVVRAL LPGAQRVRAV TPDGDELGAL
ACVDDAGCFA GTLAHDGRYR LAIDWPDARQ ITDDAYAFGT LLDEAALARF ASGDPAAVLD
CLGATPTRVD GIDGVRFAVW APNAQRVSVV GDFNMWDGRR HPMRLRRPWG VWELFVPGIG
AGEHYKYELR AADGHVLPHK ADPCARATEA PPRTASVVAD TAALDAFAWH DDGWLHARPP
ADRRFRMPWS IYEVHPESWQ RVPEEMDRSA TWDELAERLI PYVRGMGFTH VEFMPISEYP
FGGSWGYQPL AQFAPSARFG PVEGFARFVD RAHAAGIGVI VDWVPAHFPN DAHGLAQFDG
SALYEHADPR EGMHPDWNTC VFNLGRNEVG AFLIASALAW ARRYHVDGIR VDAVASMLYR
DYSRNEGEWV PNIHGGRENL ESVAFLRTLN DTLHGALAPP GVVTFAEEST AWPGVTASTG
DGGLGFDFKW NMGWMHDTLS YVREDPIHRR YHHDRMTFGL VYAFSERFVL PLSHDEVVHG
KGSLAVKMPG DAWQRLATLR AYFGFMWAHP GKKLLFMGSE FAQWAEFAHD ATPHWDLLDA
PAHRGVQRLV RDLNRTYAAE PALHALDCHA SGFFWLIGDD RDNSVFAFAR RDDTGRLVVA
ICNFTPVPRP GYRIGLPAPG HWRELMNTDA AVYGGTNAGN DGAVWTEDVP SHGQSWSATL
RLPPLATLWL SPA
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