| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6252 |
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| Symbol | |
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| ID | 6182807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 839552 |
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| End bp | 841744 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689379 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001816238 |
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| Protein GI | 172065526 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.996582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCCG ATCATTTCGT CCAGTTCTAC GAATCCGACG AGCAGCTCGT GTCGGAGGTC
GCGTCGTTCG CGGCCGATGC GTTGCGCGAC GGCGGCAGCG CGATCGTGAT CGCGCGGGCC
GACCGGCTCG CGGCGGTGCA CGAACGCCTG GATGGGCTCG GCACGGCCAT CGGCGCCGCG
GCCCGCGACC GGATCTTCAT GTCGAGCGCG CAGGCGCTGC TCGACAGCTT CATGGACGGC
GATCTGCCCG ATCCGGCGCG CTTTCGCCGC TCGATCGGCC CGATCGTCGA AGCCGCGGTC
CGCGCCGGCC GGCCCGTGCA TGCGTTCGGA GAAATGGTCT CGCTGCTGTG CGCGCAGGAC
CGGTACGCCG GGGCCCTGCG ACTGGAAGCG TTATGGGACG AACTGATCGC GCGGTACCGC
TTCTCGCTCT ACTGCGGCTA TTCGCATGAC GCGTTTCCGA GCGCCGAGCA GTCGGAGATG
TTCCGCCACG TGTGCTCGCT GCACCGCCGC ATCCTGCCCG CCGCGTCGCT GCGCAACGAC
GAAAACGAGC TGCACCTGAC GCTGGCGCTG TCCCAGCAAC GCTCGCGCGC ACTGAGCGAC
GAGATCCGCC GCCGCGAGGA CGCCGAACAG CAACGCAACG GCGTGCTGAT GCATGCGCCG
TTGCCGATCG CGCTGCTGTC GGGCCCGGAG CACCGGATCG TGCTCGCGAA TCACCGCTTC
TCCGCGCTGT GCGGCCGGAC CGACATCGTC GACCGGCCGC TGACGTCGGT GCTGCCCGGC
GGCGACACGC CCGCAATCGT GCAGGCGCTT GAAACCGCCC GCGAGCAAGG CTGCTCGACG
ACGATCGGCG AGCACCACGA CCGGCCCGAA CCGGACGGCG CCGCCCGCGT GTACCGGCTG
CATTTCAATC CGCAGCCGCT CGCCGAGGGG CTCGGCGTGA TCGTCAGCGC GGTCGAGGTG
ACCGAGCACG TCGCCGCGCG CGAGAAGCTC GTCGCCGCGA ATGCCGAGCG CGACCGGCTG
CTGGGCGAAC TGCGCGACGC GAACCAGGCG AAGGACCAGT TTCTCGCGGT GCTCGGCCAC
GAGCTGCGCA ATCCGCTGAC GCCGATCTCG CTCGCGCTCG AGCTGATCCG CAACCGCGAC
GGCCAGGCGA CGCCGAACGA GATCGCGATC ATCCAGCGGC AGCTCGATCA CATGGTCCGG
CTGATCGACG ACCTGCTCGA CGTGTCGCGC ATCACGCGCG GCAAGATCAC GCTGAAGAAG
GAATCCTTGC GGCTCGCGGA CATCGTCGAC CGCGCGGTCG AGGTCGCCAG CCCGCTGCTC
GAGCAGCGCC GTCACCGCCT GCATGTCGAC GCCGATCCCG ACGCGCGCTG CCACGGCGAC
CCCGTACGGC TGTCGCAGGT GGTCGCGAAC CTGCTGACCA ACGCGGCGAA ATACACGATG
CCGGGCGGCG ACATCACCGT GCGCGCGACG CACGGCGCGG ACGGCGCCGC GATCATCGAG
GTTTGCGACA ACGGCGCCGG CATTCCGCCC GACCGCCTCG ACAGCATCTT CGAGCCGTTC
TACCGGCTCG ACGGCGAAAC GAAGCAGGCG CACGGCGGCC TCGGCATCGG CCTCGCACTC
GTGCGCAGCC TCGTGAACCT GCATGGCGGC ACGGTGCGCG CGGACAGCGC CGGCCCCGGC
TGCGGCAGCA CGTTTACGAT CGCGCTGCCC GAATACCGGC CGAAAGCCGT GGCGGTGGTC
ACGCCGCAGC CGCCGCCGGG CATCCGCGAG TTGGCGCCGG GCAGCACGGG CCGGCGCGTG
ATGCTGGTCG ACGACAACGA GGATGCCGCG TCGACGCTCG CGCAATGGCT GCGTGACGCC
GGCCACGAAG TCGCCGTCGT GCACGACCCG GTGACCGCGC TGGCCGCCTA CCGCGCGTAC
CGTCCCGACG TCGCGATCCT CGATATCGGG CTGCCGGTGA TGGACGGCTA CGAGCTGCTG
CGGCGGCTGA AGGCGATCAA CGAAGTCACG ACGTGCATGT TCCTCGCGCT GACCGGTTAT
GGCCGCAGCG CGGATCGCGA GCGCTGCCTC GCCACCGGGT TCCTGCAGCA CTTCGTGAAG
CCGGTCGATC CGGCCGCGCT GCATCTCGCG ATGATGCTGC CCCGGCCGGG CGGCGATGCA
CACGACGGCA CGGGCGCCGA AGCCGGACGC TGA
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| Protein sequence | MRADHFVQFY ESDEQLVSEV ASFAADALRD GGSAIVIARA DRLAAVHERL DGLGTAIGAA
ARDRIFMSSA QALLDSFMDG DLPDPARFRR SIGPIVEAAV RAGRPVHAFG EMVSLLCAQD
RYAGALRLEA LWDELIARYR FSLYCGYSHD AFPSAEQSEM FRHVCSLHRR ILPAASLRND
ENELHLTLAL SQQRSRALSD EIRRREDAEQ QRNGVLMHAP LPIALLSGPE HRIVLANHRF
SALCGRTDIV DRPLTSVLPG GDTPAIVQAL ETAREQGCST TIGEHHDRPE PDGAARVYRL
HFNPQPLAEG LGVIVSAVEV TEHVAAREKL VAANAERDRL LGELRDANQA KDQFLAVLGH
ELRNPLTPIS LALELIRNRD GQATPNEIAI IQRQLDHMVR LIDDLLDVSR ITRGKITLKK
ESLRLADIVD RAVEVASPLL EQRRHRLHVD ADPDARCHGD PVRLSQVVAN LLTNAAKYTM
PGGDITVRAT HGADGAAIIE VCDNGAGIPP DRLDSIFEPF YRLDGETKQA HGGLGIGLAL
VRSLVNLHGG TVRADSAGPG CGSTFTIALP EYRPKAVAVV TPQPPPGIRE LAPGSTGRRV
MLVDDNEDAA STLAQWLRDA GHEVAVVHDP VTALAAYRAY RPDVAILDIG LPVMDGYELL
RRLKAINEVT TCMFLALTGY GRSADRERCL ATGFLQHFVK PVDPAALHLA MMLPRPGGDA
HDGTGAEAGR
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