Gene BamMC406_6220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6220 
Symbol 
ID6182011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp809580 
End bp810272 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID641689348 
Productsignal-transduction protein 
Protein accessionYP_001816207 
Protein GI172065495 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCGC GTGATGTGAT GACAACTCCG GTCATTTTTG CTAGTCCGGA GATGAGCGTT 
CAGGAGACCG CGAAGCTGCT CGCGGAGCAC TCGATCAGCG CGGTTCCCGT AATCGATGCC
GAGGGAAAGC TGATCGGGAT CGTCAGCGAA GGCGACCTCG TGCGCCGCGT CGAGATTGGT
ACTCATGCCA GGCGCCGCTC CTGGTGGTTG GAGTTGCTCG CGTCCACCCG TGAATTGGCC
AGCGAGTATG TAAAGGAACA CTCGCAGACT GTGAAGGACC TGATGAGTGT CGACGTCGTT
ACGGTCGCGG AGGACACGCC GCTGTCCGAA GTTGCCGAAT TGCTGGAACG GCACCGCATC
AAGCGCGTGC CGGTCGTCGA TAACGGCAAG GTGGCGGGCC TGGTGAGTCG AGCCGATCTC
GTGCGCGCGC TTGCCAGCGA TACGCACGAC AAACGAAATT CGTTCGCACA TGCGGACGTC
GAGATACGCG AGGCGATACT GAATGCGATG TCTGGCCAAC CTTGGGCGCT AACGCGCGGC
CAGATCATCG TCAAAAACGG AAAGGTACAT CTATGGGGCG TGATCTTCAG CGAGGAGGAG
CGCAAAGCGG TGTGCGTGGC AGCTCAGACT GTACCGGGCG TCAAACAGGT GATCAGCCAT
CTCGTCTATC CTGTTACGCT TCCCTCGATG TAA
 
Protein sequence
MRARDVMTTP VIFASPEMSV QETAKLLAEH SISAVPVIDA EGKLIGIVSE GDLVRRVEIG 
THARRRSWWL ELLASTRELA SEYVKEHSQT VKDLMSVDVV TVAEDTPLSE VAELLERHRI
KRVPVVDNGK VAGLVSRADL VRALASDTHD KRNSFAHADV EIREAILNAM SGQPWALTRG
QIIVKNGKVH LWGVIFSEEE RKAVCVAAQT VPGVKQVISH LVYPVTLPSM