Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6211 |
Symbol | |
ID | 6182002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 798255 |
End bp | 800162 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641689339 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001816198 |
Protein GI | 172065486 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.156837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA CATTCGATTA CTCCGGGCTG CTGATCCCGA TCGCGTTCGC CGTGCTGGTC GCGGTTCAAC TGCTCGCGTA TCACCCGGCC GCGACGTCGA TTTCCTACAG CGATTTTCAC CACCTGATCG ACGCACGCCT CGTCGATGAT CTGGAAATCG GCCCGTCGTC GATCTCGGGC AAGCTGCGCA TGCCCGAAGC GGGCGCCGCG CTGCCCGCTT CCGACGCGGC GGAGTTGAAG GGGGCCGGAC CGCCGTGGCG CTTCACCACG AACCGGGTGA GCGACGAAGG TCTGGTCGCC GCGCTGACGG CTGCCGGGAT TCGCTACCGC GGCGCGACGG ATACGGGCTG GATCGGGACG CTCGCGGCAT GGAGTTTCCC GTTGATCGGC TTCGTCGTGA TCTGGAGTTT CATGCTGCGA AGGCCGGGCG GAATGCGGGA TATGAGCGGC ATGGGAAAGA GCCGGGCCCG CGTGTACATG CAGAAGGAAA CCGGCATCAC GTTCGACGAT ATCGCGGGCA TCGACGAGGC GAAGGCCGAA TTGCAGCAGA TCGTCGCGTT TCTGCGCAAC CCCGAACGCT ATCAACGGCT CGGCGGCAAG ATCCCGAAGG GCGTACTGAT CGTCGGAGCG CCCGGTACCG GCAAGACGCT GCTGGCCCGT GCGGTCGCCG GCGAGGCCGC GGTGCCGTTC TTCACGATCA GCGGCTCGGC GTTCGTCGAG ATGTTCGTCG GCGTCGGTGC TGCGCGCGTG CGCGATCTCT TCGAGCAGGC CCAGCAGAGC GCGCCGTGCA TCGTGTTTAT CGACGAGCTC GATGCGCTCG GCAAGGCGCG CAGTGTCGGC CTGATGTCGG GCAATGACGA GCGCGAGCAG ACGCTGAACC AGCTGCTCGT CGAGATGGAC GGCTTTCAGG CCAATTCGGG CGTCATCATC GTGGCCGCGA CCAACCGGCC GGAAATCCTG GATCCCGCGC TGCTGCGCCC GGGACGGTTC GACCGGCACA TCGCGATCGA CCGGCCGGAC CTGACCGGGC GCAAGCAGAT CCTCGCCGTG CATACGAAGC GCGTGAAGCT TGCCCCGGAA GTCGACCTTG CCGAACTGGC GCAGCGCACG CCGGGCTTCG TCGGCGCCGA TCTCGCGAAC GTCGTCAACG AAGCCGCGTT GCATGCCGCC GAACTCGGCA AGCCGGCCAT CGGAATGGCC GATTTCGACG AAGCCATCGA TCGTGCGATG ACCGGCATGG AGCGCAAGAG CCGCGTGATG AACGAACAGG AGAAGCGGAC CATCGCGTAC CACGAATCGG GGCATGCGCT CGTCGCGCAA AGCCGCGCGC ACTGCGATCC CGTGAAGAAA GTATCGATCA TCCCGCGCGG AATCGCCGCG CTCGGCTATA CGCAGCAGGT GCCGACCGAG GATCGCTACG TGCTGCGCCG CAGCGAACTG CTCGACCGGC TCGACGTGTT GCTCGGCGGC CGGGTGGCCG AGGAAATCGC GTTCGGCGAC GTGTCGACCG GCGCGCAGAA CGATCTCGAA CGCGCGACCG CGCTGGCACG GCACATGGTC ATGCAGTACG GGATGAGCGA GAAGATCGGC CTCGCGACGC TCGACGATGG CGCACGCCAG GGCGGCGCGC CGGGCGTCTG GACGCCGGGT GACGGACGCT GCAGCGAGCA CACGGCGCGA CTGATCGACG AAGAGGTGCG CGCACTGCTC GAGGATGCGC ATGCGCGGGT CATGGCGACG CTCCGCAAGC ATCGCGATGC GCTCGAACGG ATCGCGCGCA GCTTGCTGCA GCACGAATCG ATCGATCACG GCATGCTCGT GGCGCTCATC ACGCCGCCGG ACGATGCCGG CGAGGCGCCC CGGCCGGCGC CCGCCGACAC GGAAACGACC ACGGTCGCCT CCGCCTGA
|
Protein sequence | MKKTFDYSGL LIPIAFAVLV AVQLLAYHPA ATSISYSDFH HLIDARLVDD LEIGPSSISG KLRMPEAGAA LPASDAAELK GAGPPWRFTT NRVSDEGLVA ALTAAGIRYR GATDTGWIGT LAAWSFPLIG FVVIWSFMLR RPGGMRDMSG MGKSRARVYM QKETGITFDD IAGIDEAKAE LQQIVAFLRN PERYQRLGGK IPKGVLIVGA PGTGKTLLAR AVAGEAAVPF FTISGSAFVE MFVGVGAARV RDLFEQAQQS APCIVFIDEL DALGKARSVG LMSGNDEREQ TLNQLLVEMD GFQANSGVII VAATNRPEIL DPALLRPGRF DRHIAIDRPD LTGRKQILAV HTKRVKLAPE VDLAELAQRT PGFVGADLAN VVNEAALHAA ELGKPAIGMA DFDEAIDRAM TGMERKSRVM NEQEKRTIAY HESGHALVAQ SRAHCDPVKK VSIIPRGIAA LGYTQQVPTE DRYVLRRSEL LDRLDVLLGG RVAEEIAFGD VSTGAQNDLE RATALARHMV MQYGMSEKIG LATLDDGARQ GGAPGVWTPG DGRCSEHTAR LIDEEVRALL EDAHARVMAT LRKHRDALER IARSLLQHES IDHGMLVALI TPPDDAGEAP RPAPADTETT TVASA
|
| |