Gene BamMC406_6192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6192 
Symbol 
ID6182433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand- 
Start bp779100 
End bp780128 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content68% 
IMG OID641689320 
Producthypothetical protein 
Protein accessionYP_001816179 
Protein GI172065467 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.194706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.269121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCA TCGTCAAACG CGTTCCCGCG GGCGTCGCGA AACGCGGCGC ACGCCCCCGC 
ACCGTACCCG ACGCGTCGGC GGCAAAGACG CGCGGCAAAC GACTACGGAC ACGGCCGGAT 
GCGCTCGTCG CCAACGACGG CAGCCGGTGC ATCCCGCGTC GCACACGGCG CGTCGCCAAA 
CGCCCGAACC GTCCCGCTGT CGATGACGAC GCGACGCTGT TGCAGCGCGC GAGCATGCGG 
GGCATCCGGC TGCAATTGGA CTACTGGAAA GCCGAGGAGC GCCTGCAGAT TGAACGCATC 
GGCCACACGG TCGTCATCTA CGGCAGCACG CGCATCGCCG CACCGTCCGT CGCGAATGCA 
CGACTGGACG AAGCGAATCG CCTGCTTGCA GAGCGTCCGC ATGACGCGGC TCGGCGCCGC 
GCCGTCGCGG TCGCCAGCCG GCTCGTCGAG CACAGCGTGT ATTACCGCGT CGCGCGCGAA 
TTTGGGCGTA TCGTCGCGCA TGCCGACCGA TGCACGCGCA CCGCGCGGCT CGCGATCGTG 
ACCGGCGGCG GCCCCGGCAT CATGGAAGCC GCCAACCGCG GCGCCTACGA GCGCGGCGCA 
CCGAGCATCG GTTTCAACAT CGAACTGCCG CGCGAACAGG CGCCGAATCC GTACCTCACG 
CCGGATCTCT GCTTCCGGTT TCACTACTTC GCGATCCGCA AGCTGCACCT GCTCGAGCGC 
GCGAAAGCGG CGGTATTTTT TCCCGGCGGC TATGGCACGT TCGACGAGTT GTTCGAGGTG 
CTGACGCTGC TGCAGACGCG CAAGATCGCG CCGTTGCCGG TCATCCTCGT CGGCGAGGCG 
TACTGGCTCC GCGCGGTCGA CCTGTCGTTT CTCGCGGACG AAGGGATGAT CGACCGTCGC 
GACCTGGAGT TGTTCACGTA TTGCGAATCC GCGGCCGAGA TCTGGCACGC GATCGGAAGC 
TGGTACGCGC GGCGTCGACA GCGCGTGCCG GCACACGGCG ATGCCGCTCC GAAGCGGCGC 
GCCGTGTAG
 
Protein sequence
MSTIVKRVPA GVAKRGARPR TVPDASAAKT RGKRLRTRPD ALVANDGSRC IPRRTRRVAK 
RPNRPAVDDD ATLLQRASMR GIRLQLDYWK AEERLQIERI GHTVVIYGST RIAAPSVANA 
RLDEANRLLA ERPHDAARRR AVAVASRLVE HSVYYRVARE FGRIVAHADR CTRTARLAIV 
TGGGPGIMEA ANRGAYERGA PSIGFNIELP REQAPNPYLT PDLCFRFHYF AIRKLHLLER 
AKAAVFFPGG YGTFDELFEV LTLLQTRKIA PLPVILVGEA YWLRAVDLSF LADEGMIDRR 
DLELFTYCES AAEIWHAIGS WYARRRQRVP AHGDAAPKRR AV