Gene BamMC406_6183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6183 
Symbol 
ID6182424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp772706 
End bp774250 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content69% 
IMG OID641689311 
Producthypothetical protein 
Protein accessionYP_001816170 
Protein GI172065458 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG0645] Predicted kinase
[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.814041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.433204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCG ATCGCGCATT GAGTCGGCCC ACCACGTATC CGCACCCCGC GGGCCGCATC 
GAGCGGATCG AAACGCATCT GTCCGTCGTC TATCTGGCGG GGCGCTACGC GTACAAGCGC
ATCAAGCCGG TGCGTCTCGC CTTCGTCGAC CTCGTGCGCG CTGCGCGGCG GCGGCGCTGT
GCGCTCGCAG AGTGCACGCT CAATCGACCG TTCGCCGGCC CGCTGTACCT GGGCGTCTGG
CCGCTCGTCG CACGCGGCCG CCGATGCGCG TTCGCCGCGC CGGTGCCCAC CGGCGGGCGC
CGTCAGCGGC AGCAGGCGGC GCTCGGCGAG TACGTGGTGC GCATGCGCCG GTTTGACGCG
CGACGGATGT TGTCGGTCCG CAGCGCATCG CCCGATGAAG GGCTGGCGGA TGCGGACGCC
CTCGCCGCCA TGTTGGCCCG CCTTCATCTG CATGCGCCGC GCCGTGCCCC GAGGGGCTAT
CCCGGCAGTG CGGAGTGCGT CGCGGCCCAG TGCCGGCCGT TGCTCGACGC GCTCGACGTC
GCCGTGACGG ACGAAGCCGC ATTGCGGGCC TGGTACGAAG CCGAGTTGAC CCGCATCGCA
CCGCGGCTTG CCGATCGACA CGCGCATGGA TTCGTGCGCG CGTGCCACGG CGATCTGCAT
CTCGACAATA TCGTCCGCTG GCGCAACCGG ATCCTGATGT TCGACTGCAT CGAATTCGAC
GACACGCTGC GCTGGATCGA CGTGGCGAGC GATCTCGCGT TCGCGTTGAT GGATTTCTCC
GCCCACGGGC GCGAGGATTG CGCCCACCGC CTCCTTTCCG GATGGCTGGC ACGCACGGGC
GACCATGCTG CACTGGGCGT GCTGCCGTGC TACTTCGTCT ATCGGGCACT GGTGCGCGCG
CTGACCGCGA GTCTGCGCGG TGACGAAGCG GCGCGTGCCC GCTATCTGCG CATTGGTTCG
ACCATGGCCG ATGCGCGGCG CGATGCGCAA CCGGTACTGC TCCTATGTCA CGGGGTTTCC
GGCTCGGGCA AATCGCTGGC AAGCCGTGCG CTGGCGGGGC GGCTCGGGGC GATCCGGCTG
TCCAGCGATG TCGAACGCAA GCGGAGTGCC GGTGTCCCGG GGAACACCCG CCTGCCGCGC
GACACCTATT CGGACACGGC GATCGACAGG ATCTACGAAA GGCTGCTTTC GGACGCCGGC
GTGGTGCTCG ACAGCGGCTA TACGGCGATC GTCGACGCGA CGTTCCTGCG CGAACGCAAC
CGCGCGGCGT TCATCTCGCT CGCCGCACGG CTCGGCGTGC GCGTCGCGAT TCTCGATTTC
GTCGCGGGCC AGGCGACGCT CGCCGCACGT GTCGCGGCGC GAGCGGCATG CGGATGCGAT
GCCTCCGATG CCGACGCCGC CGTGCTGGCA CGACAGATCG AGCATGCCGA CCCGCTGACC
GAACTCGAAG CGGCAATCGC GATTCGTTTC GACACCGATT GCGATGTCGC GGCGTATGGG
AGCCACGCAT TCTGGGCGCC ATTGCTCGCC GCGCTACGTA CGTAA
 
Protein sequence
MQFDRALSRP TTYPHPAGRI ERIETHLSVV YLAGRYAYKR IKPVRLAFVD LVRAARRRRC 
ALAECTLNRP FAGPLYLGVW PLVARGRRCA FAAPVPTGGR RQRQQAALGE YVVRMRRFDA
RRMLSVRSAS PDEGLADADA LAAMLARLHL HAPRRAPRGY PGSAECVAAQ CRPLLDALDV
AVTDEAALRA WYEAELTRIA PRLADRHAHG FVRACHGDLH LDNIVRWRNR ILMFDCIEFD
DTLRWIDVAS DLAFALMDFS AHGREDCAHR LLSGWLARTG DHAALGVLPC YFVYRALVRA
LTASLRGDEA ARARYLRIGS TMADARRDAQ PVLLLCHGVS GSGKSLASRA LAGRLGAIRL
SSDVERKRSA GVPGNTRLPR DTYSDTAIDR IYERLLSDAG VVLDSGYTAI VDATFLRERN
RAAFISLAAR LGVRVAILDF VAGQATLAAR VAARAACGCD ASDADAAVLA RQIEHADPLT
ELEAAIAIRF DTDCDVAAYG SHAFWAPLLA ALRT