| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6165 |
|---|
| Symbol | |
|---|
| ID | 6182584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 748385 |
|---|
| End bp | 749278 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641689293 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001816152 |
|---|
| Protein GI | 172065440 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGCG CATCCGAATC GGGCCATCTC GATGACACGC CGGAGCCGGC CACCCGCGCC
GCGGACGATA TCGCCGGGTT CGTGCGCGTG CGCCGGCGCT ACTGGGGCCG CTATGTCGCG
TCGATCGCGA TCATTGCCGC GCTTGCGTAT GTGGCGGTCG CGTTCGCGCG CGGACAGATC
GAATGGCGCG TCGTCGGCCA GTTCCTGACC GCACGCTCGA TCCTGACGGG GCTCGGCAAC
ACGATCGTGA TGACCGTCCT CGCGATGACG CTCGGCGTCG TGCTCGGAGT CGTCACCGCG
GTGATGCGGC TCTCGTCGAA CCCGGTGCTC GGCGCGATCG CGCAGGGTTA CATCTGGTTG
TTCCGCGGCA CGCCGGTGAT CCTGCAACTG CTGCTGTGGT TCAACCTCGC GCTGGTGTTT
CCGACACTCG GCATCCCGGG TATCGCCGAA TACCGGACCG TCGACGTGAT GACGCCGTTC
CTCGCGGCGG TGCTCGGGCT CGGCATCAAT CAGGGGGCCT ATACGTCGGA AGTCGTGCGG
GCGGGGCTGC TGTCGGTCGA CACGGGCCAG TACGAGGCCG CGAAATCGAT CGGCATGGCG
CGCCTGCAGG CGTTGCGCCG GATCATCCTG CCGCAGGCGA TGCGCGTGAT CGTGCCGCCG
ATCGGCAACG AGCTGATCGG CATGGTCAAG CTGACGTCGC TCGCGAGCGT CGTGCAGTAC
GCGGAGATGC TGCACAACGC GCAGAACATC TACTACGCGA ACGCCCGCGT GATCGAGCTG
CTGATCGTCG CGGGCATCTG GTATCTCGCG GTCGTCACCG TGCTGTCACT CGCGCAGGCC
CGCGTCGAGC GGCGTTTCGC GCGCGGCGCG GGCCGGGCGG CGGGCCGCAC ATGA
|
|---|
| Protein sequence | MLSASESGHL DDTPEPATRA ADDIAGFVRV RRRYWGRYVA SIAIIAALAY VAVAFARGQI
EWRVVGQFLT ARSILTGLGN TIVMTVLAMT LGVVLGVVTA VMRLSSNPVL GAIAQGYIWL
FRGTPVILQL LLWFNLALVF PTLGIPGIAE YRTVDVMTPF LAAVLGLGIN QGAYTSEVVR
AGLLSVDTGQ YEAAKSIGMA RLQALRRIIL PQAMRVIVPP IGNELIGMVK LTSLASVVQY
AEMLHNAQNI YYANARVIEL LIVAGIWYLA VVTVLSLAQA RVERRFARGA GRAAGRT
|
|---|
| |