Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6140 |
Symbol | |
ID | 6182297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 724454 |
End bp | 725359 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641689268 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001816127 |
Protein GI | 172065415 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCC CCCTTATCCC TGATCTCAGC TCTCGCGAGC TTCAAGCGGT ATGTACCATC GCCGAATGCG GCAGTTTCAT GGCGGCGTCA ATCACCCTCA ATGTTTCCCA ACCAGCATTG ACGCGTACGG TCCAGCGTGT CGAGCAAGCT ATCGGTCTCG ACATCTTTCG TCGTACGACA CGACGACTGG AAATCACCGC GGCCGGTGAA GAATTCGTTG CGCTGGCCAA CCGTATTCTC GCGGATCTGC GCATCTCGGT TGACAGCATG CGCGAGATTA CGGATGAACT GCGAGGTCAA GTCATTGTTT CCACGGTGAT GTCTGTCGCA TGCATCCAGC TGCCCGGCAT CATAGCCCGC TACAGCAAGT CGAAACCGCG TGTGGAAATT CAGATTCGCG AAGGTGTCTA CGGAAAAATC GTGGAAGACG TTCGCGGTGG TGTAGCCGAC TTTGGCATCA CCTACATTGA TGATGTGCCT AACGAGCTGT CGACCATCAA ATTGGCCATC GAAGCGTTCC ATGTCGTAAT GCCGGACGGG CATCCGCTGT CGAAGAAGCC CGGTATATCG CTCGAGGAAG CATCGCACTT TCCCATGGTG TCGATGCCCA AGGAGTCACA GACGAGGCGA CATCTGGAGG GTCTAGCGCT TGCGGGCGGC TTGGTGCTTC AACACGCCGT TACAGTAAGT CAGTTCGCGA CCGTTATGCA ATGCGTTCAG GCCGGCGTTG GATTGGCGAT CCTACCGGGA GGAGCGGTAC CGAGCGCACT TAGCGCCGGT CTTGTTTCAA GGCCACTAAC GAAACCTGTC GTCAATCGGA CACTGGGAAT CGTCCTTTTG AAGGACCGAG CGCTAACGCC GAGTGCGCGT GGATTTCTTG GCCAGCTTCA AGAGTCGTGG GGATAG
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Protein sequence | MSRPLIPDLS SRELQAVCTI AECGSFMAAS ITLNVSQPAL TRTVQRVEQA IGLDIFRRTT RRLEITAAGE EFVALANRIL ADLRISVDSM REITDELRGQ VIVSTVMSVA CIQLPGIIAR YSKSKPRVEI QIREGVYGKI VEDVRGGVAD FGITYIDDVP NELSTIKLAI EAFHVVMPDG HPLSKKPGIS LEEASHFPMV SMPKESQTRR HLEGLALAGG LVLQHAVTVS QFATVMQCVQ AGVGLAILPG GAVPSALSAG LVSRPLTKPV VNRTLGIVLL KDRALTPSAR GFLGQLQESW G
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