| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6134 |
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| Symbol | |
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| ID | 6182336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 717009 |
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| End bp | 718673 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641689262 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001816121 |
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| Protein GI | 172065409 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACG AGCTCACCGC GGCACGCCGT AGTGCCTTCA GTGCCGACGA GAGGAGAGTG
GTTTTTGCCG CCTCCCTCGG GGCTGTATTC GAATGGTACG ACTTCTTCTT ATATGGATCG
TTGGCAGCAC TGATTGCCGC GCAATTCTTC AGTAGCCTGA ATCATACGAC TGCGTTTGTT
TTCGCGCTGC TGACCTTCGC GGCCGGGTTC ATTGTTCGAC CGATCGGAGC GCTTGTATTC
GGCAGACTGG GCGATCTCGT CGGTCGAAAA CACACGTTTC TATTGACGAT TCTCATCATG
GGTTGCTCGA CGCTGCTGGT CGGGCTGTTG CCTGGCTATG CAACCCTGGG TGTGGCCGCA
CCGATTATCT TGGTCGTTCT TCGAATGCTC CAGGGCTTGG CGCTTGGCGG AGAGTACGGC
GCGGCGGCGA CATACGTTGC CGAGCACGCG CCGCATGACA AGCGAGGCGG GTGGACCTCA
TGGATTCAGA CCACGTCCAC GATCGGGCTG CTGCTATCGC TGGTCTTGAT CATCACCGTG
CGTTCGCTGA CGGGTACATC GTTCGAGGTG TGGGGGTGGC GCATCCCCTT CTTGTTTTCC
GGCGTCCTGT TGGGGATCTC CGTATACGCG CGTCTTTCGA TGCATGAGTC ACCAGCGTTC
CAGCGCATCA AGGCAGAGGG ACGAACGTCT CGCGCACCGT TGTCGGAAGC ATTTGGTCAG
TGGCGCTATC TGAAGCTCGT CCTGCAGGCG CTGTTTGGAT TGCTCGCGGG ACAGGCGGTT
GTATGGTTCA CCGCGCTTTT TTACGCGATG TTCTTTCTGA CGCAGACACT GAAGGTCGAT
GCCGGCACAA CCAACCTGTT GGTTGGACTT GCGCTGGTCA TCAGCACACC GCTCTACGTA
TTCTTCGGAC GTCTTTCCGA CCGTATCGGA CGAAAGCCGA TCATTCTGTG TGGCTCGTTC
CTGGCGGCAT TGACTATCGT GCCGATCTTT CATGGGTTGA CTCATTTCGC CAATCCGGCA
TTGGCTGCCG CTCAGGCGTC TTCGCCGGTG GCCATCGTCA GCGACCCGGC CGACTGCTCG
TTCCAGTTCA ATCCAACCGG CACCGCATCG TTCAACAGTG CGTGTGACGT TGCGCGCCGT
GTGCTGTCGG CAAATTCCGC CAGTTACGCG ACAGTCGATG CAGCGGTCGG CTCAAGCACG
CGCGTCAAGA TTGGCTCGAC GGAGATCGCT GCGCCTTCGT TAAAAGGGCT TGCTCCGGCA
CAAGCGAAAA TGGCGGAGCA GCAGTTCAGG GTGGCTACGA TCAGGGCGTT GGGCGCGGCA
GGATATCCGC TGAAGGCTGA TCCGGATACG GTGAATCGCC CGATGATTCT CGTTCTGCTT
GTGCTGCTCA TGGCGTACGG GGCGATGACC CTTGGCCCTA TTGCCGCCAT TCTTGTCGAG
ATGTTCCCCA CTCGGATCAG GTACACAGCG ATGTCGTTGC CGTATCACGT CGGCAACGGC
TATTTTGGCG GGCTACTACC GACGGTGTGT TTTGCGCTGG TTGCGCAGAC AGGGGACATC
TACTTCGGGC TCTGGTATCC GGTGACAGTC GCAGCGGTGT CGTCTGTCAT AGGGCTAGTG
TTCATCCGAG AACCTCGTCG AGACGCACTT TATAGCGATG ACTGA
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| Protein sequence | MHNELTAARR SAFSADERRV VFAASLGAVF EWYDFFLYGS LAALIAAQFF SSLNHTTAFV
FALLTFAAGF IVRPIGALVF GRLGDLVGRK HTFLLTILIM GCSTLLVGLL PGYATLGVAA
PIILVVLRML QGLALGGEYG AAATYVAEHA PHDKRGGWTS WIQTTSTIGL LLSLVLIITV
RSLTGTSFEV WGWRIPFLFS GVLLGISVYA RLSMHESPAF QRIKAEGRTS RAPLSEAFGQ
WRYLKLVLQA LFGLLAGQAV VWFTALFYAM FFLTQTLKVD AGTTNLLVGL ALVISTPLYV
FFGRLSDRIG RKPIILCGSF LAALTIVPIF HGLTHFANPA LAAAQASSPV AIVSDPADCS
FQFNPTGTAS FNSACDVARR VLSANSASYA TVDAAVGSST RVKIGSTEIA APSLKGLAPA
QAKMAEQQFR VATIRALGAA GYPLKADPDT VNRPMILVLL VLLMAYGAMT LGPIAAILVE
MFPTRIRYTA MSLPYHVGNG YFGGLLPTVC FALVAQTGDI YFGLWYPVTV AAVSSVIGLV
FIREPRRDAL YSDD
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