Gene BamMC406_6118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6118 
Symbol 
ID6182320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp699076 
End bp700305 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content70% 
IMG OID641689246 
Productmajor facilitator transporter 
Protein accessionYP_001816105 
Protein GI172065393 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGT TTTCTTCAAC GCCCGGCGCG CGCTATGCGG GCGCCGTCAG GCAGGCCGGC 
GCACGCCAGG GCGCCGTGCT GCTGCTCGGC AGCAGCCTCA CCGTCATGGG CGCGGTGATG
ATCGCGCCGA TCCTGCCCAA ACTCGCGGCC GAATTCGTGC CGGCCGATCC GCGGCTGGCC
GGGCTCGTGC CGCTCGTTGC GACCGGCCCG GCGCTCGCGA TCGCGCTGTG CGCGCCGCTC
GCCGGCTGGC TTGCCGATCG CGTCGGACGC AAGATGCTGC TGTTGGTCGC GACGCTCGTG
TACGGCCTGG TCGGCGCCGC GCCTGCATGG CTCAACGACC TCGGCGCGAT CCTCGCCTGC
CGGTTCGCGC TCGGCGCCGC GGAAGCGTGC GTGATGACGT GCTGCACGAC GCTGATCGGC
GACTACTGGC GCGGCGAACA ACGCGTGCGC TACGTGAACC GGCAGGTCGT CACGATCGGC
CTCGTCGGCA CGGTGTTCTT CGTGCTCGGC GGCGCCGCCG GCGAGCACGC GTGGCGCTAT
CCGTTCTATC TCTATCTGCT GCCGATCCTG CTCGTGCCGG CGATTGCCAC CGTGCTGTGG
GAACCGCTGC GCGACGGCGA ACCCGCCGAA CCGGGCGACG GCGTCTCGAC ACTGTCCGGT
GCCCGGCTCG CATCGACGCT CGCCACCGGC TACGTGCTGA TCTGCGTCGG GATGCTCAGC
TCGTTCGTGG TTCCGGTGCA GATGCCGCAG CTGATGATCG ACATCGGCCA GCGCTCGTCG
ACAGTGATCG GCGCGGTGGC CGGCATCGGC CTGCTGTCGA CGCTGGCCGG TTCGATCGCA
TGGCCATGGT TGCGGGGCGC GCTCGGCCGC CGCTTCGTCA ACGTCGTGCT GCTTGCGCTG
CTTGCGACGG GCCTCGCGCT GCTGGCCCGC GCCCATACGG TACCGGCCAT CGTCGCGGCG
GTCGTGATTC ACGGCTTCGG CGGCGGGATG CTGGTTCCCA ATGCAATCCT GCCGCTGATG
CGCAAGCTGT CACTCGCGAT GCGCGGGCGC GGCCTCGGTG GGTTCACTGC CGCGCTCTAT
CTCGGGCAGT TCGTCAGCCC GCTGGTCGTG TTCGGTTGCG CACAGGCGTT CGGCGGCCTA
CGCCCCGCCG TGTTCGCGAT TGCGGCGGGC ACGGCCGTCA TCGCGTTGCT CTGGTTGTTG
CCGGCATCTC GCTGCCGCGG CGACGAATGA
 
Protein sequence
MNPFSSTPGA RYAGAVRQAG ARQGAVLLLG SSLTVMGAVM IAPILPKLAA EFVPADPRLA 
GLVPLVATGP ALAIALCAPL AGWLADRVGR KMLLLVATLV YGLVGAAPAW LNDLGAILAC
RFALGAAEAC VMTCCTTLIG DYWRGEQRVR YVNRQVVTIG LVGTVFFVLG GAAGEHAWRY
PFYLYLLPIL LVPAIATVLW EPLRDGEPAE PGDGVSTLSG ARLASTLATG YVLICVGMLS
SFVVPVQMPQ LMIDIGQRSS TVIGAVAGIG LLSTLAGSIA WPWLRGALGR RFVNVVLLAL
LATGLALLAR AHTVPAIVAA VVIHGFGGGM LVPNAILPLM RKLSLAMRGR GLGGFTAALY
LGQFVSPLVV FGCAQAFGGL RPAVFAIAAG TAVIALLWLL PASRCRGDE