| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6110 |
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| Symbol | |
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| ID | 6182219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 689064 |
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| End bp | 690173 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641689238 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001816097 |
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| Protein GI | 172065385 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGATCG CATTGCCGTT TTCGGCGATT GCCACTACAT CGATGGCCGA CCAGGTCGTA
AAAATAGGCC ACGTTGCCGC ACTAACCGGT GGTCAAGCGA TGGCCGGTAA AGATAGTGAA
AACGGAGCGC ATCTGGCGAT CGACGAGATA AATAAGAAAG GGCTGACGAT CGGCGGTGAG
CAGATCACAC TGCAACTTGA GGCAGAGGAC GATGCAGGCG ATCCGCGTCA GGCTACCCAG
GTCGCACAAA AGTTGGTTGA CGATCACGCT GTAGCAGTCG TCGGGCATCT GAACTCGGGC
ACGTCCATTC CAGCGTCGAA GATCTATAGC GATGCCGGGA TCGTGCAAAT CTCGCCGGCA
GCGACCAATC CCGCATATAC GCGGCAGGGC TTCAAGACAG CATATCGTGT TGTCGCCACG
GATGCTCAGC AAGGTCCGGC GCTGGCCAAC TATGCCCGAA CGAAGGGTGT AAAGACCGTA
GCGGTGGTTG ATGATTCAAC CGCCTATGGT CAAGGCCTTG CCAGCGAGTT CGCGAAGAGC
GCAACGGCGA ACGGAATTAA AGTGTTGTCG CGCGACGCAA CGAATGACAA GGCAGTTGAT
TTTCGCGCGA TTCTGACAAA AATCAAGGGC GAGAATCCTG ACGCGATCAT GTACGGCGGT
ACGTTCGCAA CGGGTGCGCC TTTTGCGAAA CAAGCGATGC AACTCGGATT GCGGGCGAGG
ATTTTCGCTG GTGACGGTGT CTGTAATGAA CAGTTGGCAG CCCTGGCCGG CTCTGCGGTG
GGTAATATTG TATGCTCGGA AGCAGGGGCC GCACTGGAGA AGATGCCGGG CGGTGAGGCG
TTCAAAGCGA AGTACGCAAA ACGCTTTAGT CAACCCATCC AGCTTTATTC TCCCTACGCA
TACGATGCTG TTTATATCAT TGTCGATGCG ATGAAGCGAG CGAACTCCGT GCAGCCGTCG
AGAATCCTCG CGGTAATGCC AAAGACAGAT TATTGGGGCG TGCTAGGCCG GGTGACATTC
GACTCAAAGG GTGACCTGGA GCACGGCATC ATTTCGCTCT ACACCTACAA GGAAGGAAAA
AAGACGCTTA TCGACGAAGT GAAGATGTAG
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| Protein sequence | MVIALPFSAI ATTSMADQVV KIGHVAALTG GQAMAGKDSE NGAHLAIDEI NKKGLTIGGE
QITLQLEAED DAGDPRQATQ VAQKLVDDHA VAVVGHLNSG TSIPASKIYS DAGIVQISPA
ATNPAYTRQG FKTAYRVVAT DAQQGPALAN YARTKGVKTV AVVDDSTAYG QGLASEFAKS
ATANGIKVLS RDATNDKAVD FRAILTKIKG ENPDAIMYGG TFATGAPFAK QAMQLGLRAR
IFAGDGVCNE QLAALAGSAV GNIVCSEAGA ALEKMPGGEA FKAKYAKRFS QPIQLYSPYA
YDAVYIIVDA MKRANSVQPS RILAVMPKTD YWGVLGRVTF DSKGDLEHGI ISLYTYKEGK
KTLIDEVKM
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