| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6057 |
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| Symbol | |
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| ID | 6182076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 621502 |
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| End bp | 623085 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689187 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001816046 |
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| Protein GI | 172065334 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.195883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG ATATCGACAA CGGCGGCAAG GGCGGCTTCA CGCGCCGCGA CATGATGAAG
GTCATGGCGG CGAGCGGCAT GATGGCCGCC GGCGCCGGCG GACTGCTGAT GACCCCCGGC
TCTGCATTCG CCGCGCCCGC GCCGAAGCGC GGCGGCAAGA TCCGGGTCGC GAACGAAGCC
GGCTCGACGG CCGATACGCT CGACCCGGCC AAGGGCTCGA CGGGCGCGGA CTACACGCGC
TTCTTCATGT TCTACAGCGG CCTCACGCAG CTCGACGCGA GCCTGACGCC GCAGATGAAC
CTCGCCGAGT CGCTGCAGAC GACCGATGCG AAGACGTGGA TCATCAAGCT GCGCAAGGGC
GTCACGTTCC ACGACGGCAA GCCGGTCGGC CCGGCCGACG TGGTGTTTTC GCTGATGCGC
CACAAGAACG CGGCCACCGC GTCGAAGGTC AAGACGCTTG CCGAACAGTT CGTGGACGCG
AAGGCGAGCG GCCCGGACGA AGTCACGCTC ACGCTCGCCA GCGCGAACGC GGACCTGCCG
GTGATCCTCG CGACGCCGCA ATTGGTGATC GTCAAGGACG GCACGACCGA CTTCTCGACC
GGCATCGGCT GCGGCCCGTA CAAGCTGAAG TCGTTCAAGC CGGGCGTGTC GACCGTCGGC
GTGCGCAACG ACAGCTACTT CAAGCCGGGC AGGCCGTATC TCGACGAGAT CGAGCTGATC
GGCATCAGCG ACAGCGCCGC GCGCCTGAAC GCGCTGCTGT CGGGCGACGT GCACCTGATC
AACGCGATCG ATCCGCGCTC GACGCAGCGG GTCTCGTCGA CGCCGGGCTA CGCGCTGAAG
GAAACCAAGT CGGGCCTCTA TACCGACCTG ATCATGCGCA GCGACAACCC GATCGTCTCG
AGTCCCGATT TCGTCGAAGG GATGAAGTAC CTGTTCGATC GCGAGCAGCT CCGCACGGCG
GTGTTCCGCG GCTACTCGGT GATCGGCAAC GACCAGCCGA TTCCGCCGGG GCACCGCTAC
TTCAACGCGT CGCTGCCGCA GCGGGCGCAC GATCCGGACA AGGCCAAGTT CCTGTTCAAG
AAGGCGGGCG CGCTCGGCGC CACGTTGCCG CCGGTCTATG CGACGTCCGA CGCGAACGGG
TCGATCGAAA TGGCCGTGCT GCTGCAGCAG GCCGGCCAGA AGATCGGGCT GAACCTGCAG
GTCAACCGCG CGTCGCCCGA CGGCTACTGG TCGAACCACT GGATGAAGCA CCCGCTCACC
TTCGGCAACA TCAACCCGCG CTCGAGCGCC GACGTGCTGT TCACGCAGTT CTTCAAGTCG
GATGCGCCGT GGAACGAGTC GGGCTGGAAG AACGCGAAGT TCGACCAGCT GCTGCTCGCC
GCGCGTTCGG AAACCGACGA CGCGAAGCGC AAGCAGATGT ACGGCGACAT GCAGGTGATC
GTGGCGCAGC AGGGCCGGGT CGGCATTCCG GCGTTCATCA GCTTCCTCGA CGGCTACGAC
AAGCGGCTCG CGGGCCTCGG CTCGATCCCC ACCGGGCCGA TGATGGGCTT CACGTTCGCC
GAGAACGTGT GGTGGAACGC ATGA
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| Protein sequence | MSDDIDNGGK GGFTRRDMMK VMAASGMMAA GAGGLLMTPG SAFAAPAPKR GGKIRVANEA
GSTADTLDPA KGSTGADYTR FFMFYSGLTQ LDASLTPQMN LAESLQTTDA KTWIIKLRKG
VTFHDGKPVG PADVVFSLMR HKNAATASKV KTLAEQFVDA KASGPDEVTL TLASANADLP
VILATPQLVI VKDGTTDFST GIGCGPYKLK SFKPGVSTVG VRNDSYFKPG RPYLDEIELI
GISDSAARLN ALLSGDVHLI NAIDPRSTQR VSSTPGYALK ETKSGLYTDL IMRSDNPIVS
SPDFVEGMKY LFDREQLRTA VFRGYSVIGN DQPIPPGHRY FNASLPQRAH DPDKAKFLFK
KAGALGATLP PVYATSDANG SIEMAVLLQQ AGQKIGLNLQ VNRASPDGYW SNHWMKHPLT
FGNINPRSSA DVLFTQFFKS DAPWNESGWK NAKFDQLLLA ARSETDDAKR KQMYGDMQVI
VAQQGRVGIP AFISFLDGYD KRLAGLGSIP TGPMMGFTFA ENVWWNA
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