| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6047 |
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| Symbol | |
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| ID | 6182066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 608492 |
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| End bp | 610450 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689177 |
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| Product | beta strand repeat-containing protein |
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| Protein accession | YP_001816036 |
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| Protein GI | 172065324 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
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| TIGRFAM ID | [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.649226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGTAT CACGGAGCCG TTTCCCGCTG CACGTCGCAG CGCTGTCGAG TGCGTTCGTT
CTGGTCGCCT GCGGCGGCGG TGACGACGTC GCGTCGACGA ACCCGACCAT CGCGGCCGTT
CCCGCGCCGC CGGCGGACCC GGGCTTCGTC GACAGCGCCC CCGTGCCGAG CGTGCCGGCC
TTCGTCGACA ACATCGCGAC CAACCAGCGC GGCGACGCGC GCTATGCCAC GCTGTCGACC
AACGCGGCCG TGCGCGTGGT GAGCCGCTTC CTCGACTTGT GGCAGCCGTC GACGATGCTG
GTCGATGCGG GCGTGAGCGC GCCGGCCAAC GGCGCGTTTC CGGCGATCTC GCCGTCGACC
TGCTCGGGCC TGCCAGGCAG CGGCACGCCG TGCGGCACGA TCCTGAACGA CACGGTGCTG
GCGGCGAATG TGCAGTACGT GGTCAACGCA ACGACCGCGC GCACGCAACA GCAGGCCGAC
GCCGCCTACT TCGACGACCG GCGCGGCAAG GGCTACAGCG TGACCGACGG CATGGGCCCG
CTCACCAGCG CGTGGCGCAC GGCCGCGCAG CAGACCACCA GCATCACCAG CGTGCCCGCC
GACGCGACAA CGGTGCTGTA CAACGACGCC GGCAACAACG TCGGTGTCGG CAGCAGCACG
AACGCGAGCT TCGGCAAGGT CGTCGACCTG CTCAACGAAA TGGGCACCAA CGCGTCGACC
GAACCGTCGA AGCGCTTCTA CAAGTACGCG CGGCCGTATC GCTGGAGTTC GAGCGTCGTC
GTCGCGCCGA CGCTCGTGCC GGCGGAAAGC ACGACGCCCG CGACCGACGG CGGCTTCATC
AGCGGCCACG AGGCCGAAGC GATGCGCGAT GCGATGACGA TGGCGTGGCT CGTGCCGGAG
CGATTCCAGG AGATGGTGAG CCGCGGCCTC GAACTGGGCG AGAACCGGAT CCTCGCCGGC
ATGCACTCGC CACTCGACGT GATCGGCGGC CGCATGCTCG CGCTGGCTGT CAGCGCGGCG
AACCTGAGTG CGTATGCGAG CGATGCGCAG GCCGCGTACA ACCAGGCCCA CCAGGCGCTG
CAGCAGCTCA CGGGGACGAC CGGCACGACG TTCGCCGCGT TCGCGCACTC GGGCACGCCG
GCCAACGACC GGTTCGCCGA TTACACGGCG AACAAGGCGG CCTTCGCGCG CCGCATGACG
TTCGGCTTCG GCGCGATCGA GTCGACCGAC GCACCGCCCG TCGTGCCGAA GGGCGCGGAA
ATCCTGCTGC AGACGCGCTT CCCGTACCTG AGCGCCGACC AGCGCCGCGT CGTGCTGAAG
ACGACCGAGC TGCAGTCCGG CTACCCGGTG ATGGACGACG CGGAAGGCTG GGGCCGCCTG
AACCTGTTCG CCGCAGGCGA CGGCTACGGC GCGTTCAATG GCAACGTGAT CGTGTCGATG
GACGCATCGC AGGGCGGACT CAACGCGGCC GACCAGTGGC GCAACGACAT CGCCGGCGCC
GGCAAGCTGA CGCTGCAAGG CACCGGCACG CTGACCCTGG CGGGCAACAA CCGCTATGCG
GGAGGCACTC AGGTCAATGG CGGCACGCTC GCCGCGGCCT CCGCGTCGGC GTTCGGCAAT
GGCGACGTGT ACGTCGGTGC CGGTGGCAGC GTCCGGATCG CGGCGAGCGT GCCCGTCACG
ATCGCGACGC GCTATACGCA GCTCGACAAC GCGACGCTCG AACTCGACAT CGACGGCAAC
GGCGGCGGGC GGCTGCGCGT GGGCGGGCAA TTGACCGTCG CGGGCGGTAC GCTGCACGTG
AAGTTCGTGA ACGGCTATGC GCCGAAGGCC GGCGACACGA TCGCGCTGAT CGACGGCGCT
GCGGGCGCGG CGAAGTTCTC GACGGTCACG GTAGACGGGT TCAAGGCGAC GCCGGTTTAT
ACGGCGACGG GCGTGTCGGT GAGGTTGTCC GCGTCGTGA
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| Protein sequence | MLVSRSRFPL HVAALSSAFV LVACGGGDDV ASTNPTIAAV PAPPADPGFV DSAPVPSVPA
FVDNIATNQR GDARYATLST NAAVRVVSRF LDLWQPSTML VDAGVSAPAN GAFPAISPST
CSGLPGSGTP CGTILNDTVL AANVQYVVNA TTARTQQQAD AAYFDDRRGK GYSVTDGMGP
LTSAWRTAAQ QTTSITSVPA DATTVLYNDA GNNVGVGSST NASFGKVVDL LNEMGTNAST
EPSKRFYKYA RPYRWSSSVV VAPTLVPAES TTPATDGGFI SGHEAEAMRD AMTMAWLVPE
RFQEMVSRGL ELGENRILAG MHSPLDVIGG RMLALAVSAA NLSAYASDAQ AAYNQAHQAL
QQLTGTTGTT FAAFAHSGTP ANDRFADYTA NKAAFARRMT FGFGAIESTD APPVVPKGAE
ILLQTRFPYL SADQRRVVLK TTELQSGYPV MDDAEGWGRL NLFAAGDGYG AFNGNVIVSM
DASQGGLNAA DQWRNDIAGA GKLTLQGTGT LTLAGNNRYA GGTQVNGGTL AAASASAFGN
GDVYVGAGGS VRIAASVPVT IATRYTQLDN ATLELDIDGN GGGRLRVGGQ LTVAGGTLHV
KFVNGYAPKA GDTIALIDGA AGAAKFSTVT VDGFKATPVY TATGVSVRLS AS
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