| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6018 |
|---|
| Symbol | |
|---|
| ID | 6181903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 574615 |
|---|
| End bp | 575577 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641689148 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001816007 |
|---|
| Protein GI | 172065295 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA TCAAGCTGCA TCAGTTGCAG GCGCTCGTCG CGAGCGCGGA GGCCGGCAGC
ATCCGCGGCG CGGCGCGCAC GCTCGGGCTG TCGCAGGCGG CCGTCACGCG CGCGCTGCGC
GAGCTGGAGG CCAGCGAGCG CCTGCCGTTG CTCGTGCGCG CGCCGGAAGG CATCGGCTTC
ACCGAGTACG GGAAGACCCT GCTCACGCAC GCTAAGCTCG TGCTCAAGCA ACTGGAGCAC
GCGCAGAGCG ATCTCGAGCG GATGCGCGGG CGCGTCGAGG GGCGGCTGAG CGTCGGCGTC
ACGCCGTGGC TGACGATGAC GTTCCTCGCG GAAACCGTGC TGCGGTTTCG CGAACGGATG
CCCGACGTGC GCCTCGAGCT GTACGAAGCG CTGATGGCCG TCGCGCAACC GCTGCTGCGC
GACGGCAGCA TGGATTTCGC GCTCGGCCAC GTGCAGCCCG GCAGCAGCGC GCAGGAATTT
GCATTCGAGC CACTGCTGCG CTACGACACG TCGGTGATGG TGCGCGCCGG CCATCCGCGC
GAACGCGCGA AGTCGGTGCA CGACCTGCTC GATTGCGACT GGGTGCTGAA TTCGTCGCCC
GACGGTCAGG CCGCGCTCGT CGACTATCTG TTCACGCGGC ACGGCGCGCA GATCGACGAA
CGGCGCATCG TGCGCGCGCA GTCGGTCGCG ATGCTGCAGA CGATGCTCGA ACAGGCCGGC
ATGTGCACGT GGTGCCCGAC CATCCTCGCG GCCGTGCCGC CGTTCGGCGA GCGGATGCGC
GTGCTGTCGC TGAAGGAAAC CTTCGAGCCG AGCGAACTCG GCATCGTCAC GCGCCGCAGC
AGCACGCTGA GCGACGCCGC GCGCTGCTTC ATCGACTGCC TGCTGCAGAC GATCCGGCGG
CATGCGCGCT CGGCGCGGAA GGAAGATCTC TCGCTGTTCC GCACGCTGAC GCTGTTGATC
TGA
|
|---|
| Protein sequence | MSTIKLHQLQ ALVASAEAGS IRGAARTLGL SQAAVTRALR ELEASERLPL LVRAPEGIGF
TEYGKTLLTH AKLVLKQLEH AQSDLERMRG RVEGRLSVGV TPWLTMTFLA ETVLRFRERM
PDVRLELYEA LMAVAQPLLR DGSMDFALGH VQPGSSAQEF AFEPLLRYDT SVMVRAGHPR
ERAKSVHDLL DCDWVLNSSP DGQAALVDYL FTRHGAQIDE RRIVRAQSVA MLQTMLEQAG
MCTWCPTILA AVPPFGERMR VLSLKETFEP SELGIVTRRS STLSDAARCF IDCLLQTIRR
HARSARKEDL SLFRTLTLLI
|
|---|
| |