Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5994 |
Symbol | |
ID | 6181946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 547564 |
End bp | 548964 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641689124 |
Product | AAA ATPase |
Protein accession | YP_001815983 |
Protein GI | 172065271 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0606] Predicted ATPase with chaperone activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.41679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGA TCCCCACCGA ACCGAAACGC GACGCGCAGG TTGCACACCT GCCGTATCCG CCGCCGTCGC GGGAGGTGCA TGCGAAACCG GGCGCGCTGC TGCCGCCGGC GCCGCGCTCG CTCGAGGAAA CCGGCTTGAC CCAGGCGTTC GTCGCAGGGC TCGTGCTGAA GTCGACGCTG GTGCTCGGTC GCCCGTCGTA CGGTGTCCTG ATCGAGCGCC ACTGCCTGCC GCTCGCGGTG CTCGATGATG TCTTCGCGTT CCTGGTGCGC GAGCATCTGG TCGAACTGAC CCATCGCGGC AAGACCGACC TCGACGTGAC GTTCCGCCTG ACCGACGCGG GCCGCGTGCT CGCGCTCGAA GAGCGTGCGC GCAGCAGCTA CAGCGGCCCC GCGCCGGTGA CGCTCGACGC GTATCTCGAC TGCGTGTCCG ACCATTCGGT GCGCAAGCTG CGCGTGTCCC AGAACGACGT GTGGGCCGTA TTCGAAGGCG TCGTCATGGA CACGGCGGTC CTCGATTCGG CGGCCGCGGC GCTCAACGCC GGCCGTCCGC TGCTGATTCA CGGCCCCGCC GGCAGCGGCA AGACCTTCCT CGCGGAGCGG CTCGGCGCGC TGATGGGCGG CCACGTGCCG GTGCCGCACG CCATTTACGC CGCCGGCGAA GTGATCCAGA TCTACGACCC GATCGTGCAT GTCGACGCGG CGTCGCAAGC CGACGGCCAA TCGGCCGATC GCCGCTGGCG CCTGTGCGAG CGGCCCGTCG TGATGTCCGG CGGCGAGCTG ACGCTCGACG AGCTCGACCT GCGCCGCGAC GAAGGAGCGG GCTTCTATCA GGCGCCGCCG CACATGAAGG CGAACATGGG CATGTACATC GTCGACGATC TCGGCCGCCA GCGCGTCGAG CCGCGCGACC TGCTCAACCG CTGGCTGCGC CCGCTCGACC GCGGCGTCGA TTTCCTGACG CTCGAGTCCG GCAATCGTCT CGTGCTGCCG TTCGACGTCT GGCCGGTGTT CTCGAGCAAC CTGGCACCGG AGCAGTTCGC CGACGATGCG TTCCTGCGCC GGCTCGGCTC CAAGCTTCAC GTCGGCGCGA TGTCGATCGA CCACTACCGT GCGCTGTTCG ATGCCGCATG CGTGTCGCTC GGGCTGGTGC CAGCGCAGGA CGCATTCGAC TATCTGCTGC ACCGGCTGCA CCTGCCGAGC GGCAAGGCCT ATCTCGCATG CTTCCCGATG GATCTGCTGC GCCTCGTCGC CGCCGGCGCG CGGTATCGCG GCGATCCGCC CGAAGTGACG CACGACGCGC TGTACGACGC ATGGGCCAGC TATTTCGGCA CGGTGCCGGA GCGCGACGGC GGGCATCCGC CGCCTGTCGA TCACGGCGGG CGCACGTACA TAACCGGTTG A
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Protein sequence | MNTIPTEPKR DAQVAHLPYP PPSREVHAKP GALLPPAPRS LEETGLTQAF VAGLVLKSTL VLGRPSYGVL IERHCLPLAV LDDVFAFLVR EHLVELTHRG KTDLDVTFRL TDAGRVLALE ERARSSYSGP APVTLDAYLD CVSDHSVRKL RVSQNDVWAV FEGVVMDTAV LDSAAAALNA GRPLLIHGPA GSGKTFLAER LGALMGGHVP VPHAIYAAGE VIQIYDPIVH VDAASQADGQ SADRRWRLCE RPVVMSGGEL TLDELDLRRD EGAGFYQAPP HMKANMGMYI VDDLGRQRVE PRDLLNRWLR PLDRGVDFLT LESGNRLVLP FDVWPVFSSN LAPEQFADDA FLRRLGSKLH VGAMSIDHYR ALFDAACVSL GLVPAQDAFD YLLHRLHLPS GKAYLACFPM DLLRLVAAGA RYRGDPPEVT HDALYDAWAS YFGTVPERDG GHPPPVDHGG RTYITG
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