Gene BamMC406_5980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5980 
Symbol 
ID6181932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp531611 
End bp533020 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content67% 
IMG OID641689110 
Productresponse regulator receiver modulated metal dependent phosphohydrolase 
Protein accessionYP_001815969 
Protein GI172065257 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAT CCGCGATGAA CGGAGCGAAC GATGCACTAC CCGAAACGAT CGCCGAAGCC 
GCATCCGGCG ACACCGCCGC CGCTGCGTCG ATCCTGCTGG TCGACGATGA GCCGAGCGTG
CTGTCCGCGC TCAAGCGCGT GTTGCGGCCC GCGCGCTACG GCGTCCTGAC TGCCGACAGC
GGCGAAGCGG CGCTCGAGAT CCTGGCGTCG ACCGAAGTCG ACCTGATCGT GTCCGACATG
CGGATGCCGA ACATGAGCGG CGCGGCGTTT CTGTCGCGCG CCCGCTCGCT GTACCCGGAC
ACGATGCGCA TCCTGCTGAC CGGCTATTCC GACATCGCGT CGATCGTGGA GGCCGTCAAC
GAAGGCGGCG TGTACCGCTA CCTGAACAAG CCGTGGGACG ACCACGACCT GCTGATGACG
ATCGAGCAGG CGCTCGAGCA GCGGCGCTTG CGCGCCGAAG CCGCGCGGCT CGCCGCATTG
ACCGAAGCGC AGAACGAAAC ACTGCGCCGC TTCAATACGG ATCTCGAAAC ACAGGTGCGC
GCGCGCACCG AGGAACTCGC GCAAACCGTG CTGTTCCTCG AAGCGGCGCA GGCCGACCTG
AAAAGCAGTT TCACCGCGAT GGTCCAGGTG TGCGCGAGCA TGATCGAACT GCGTTGCGGG
ACTGCCGGCG GGCATGCGAT GCGCGTCGGC GAGATCGCGC GGCATCTCGC GCTGTCGGCC
GGGATGAGCA ATCTGCACGC GCAGGACGTC TATTTCGCGG GGCTGCTGCA CGGCATCGGC
AAGCTGTCGC TGCCCGACGA GCTGCTGCAC AAGCCGCTCG TGAAGATGAC GACGGACGAA
CACAGCCTGT TCCAGCAGCA TCCGCTGCGC GCGCAGATGG TGCTCACGCC GGTCGCGCAG
TTGCACAAGG TCGCGTCGAT CGTGCTGCAC CAGTACGAGC GATACAACGG GCGCGGCACA
CCGGACGGCC TGACGGGCGA CGCGATTCCG CTCGGCTCGC GGATCGTCGC GATCGCGCGC
GACTTCGAAG GGCTGCGCAA CGGCGAGATC GGTGCGCCGC ATTCGGTCGA GCAGGCGATT
GACGTGCTGC ACTCGCAGGC CGGCGTGCGT TACGATCCGC TGCTCGTCGC GCGCTTCATC
GAACTGATGC GGCATCCGGC GAGCCTCGGC ATCGCGACGT CCGTCGCGGA GGTTCAGTCC
GCGCAACTGC GCGAAGGGAT GCAGCTCGCC GACGATCTGC GCACGCATCG CGGCGTGCTG
CTGATGACGA AGGGCAGCGT GATGTCGGCG CACCAGATCG AGCTCGTGCG TCGCTTCGAG
GCGCGCGAAG GGACTTCGTT CGACATCCTG GTGCTGACCG GTGCCGCCGC GTCGAAACAG
GCGCCGGCCG ACGCGGCGCC GCCGGCCTGA
 
Protein sequence
MTTSAMNGAN DALPETIAEA ASGDTAAAAS ILLVDDEPSV LSALKRVLRP ARYGVLTADS 
GEAALEILAS TEVDLIVSDM RMPNMSGAAF LSRARSLYPD TMRILLTGYS DIASIVEAVN
EGGVYRYLNK PWDDHDLLMT IEQALEQRRL RAEAARLAAL TEAQNETLRR FNTDLETQVR
ARTEELAQTV LFLEAAQADL KSSFTAMVQV CASMIELRCG TAGGHAMRVG EIARHLALSA
GMSNLHAQDV YFAGLLHGIG KLSLPDELLH KPLVKMTTDE HSLFQQHPLR AQMVLTPVAQ
LHKVASIVLH QYERYNGRGT PDGLTGDAIP LGSRIVAIAR DFEGLRNGEI GAPHSVEQAI
DVLHSQAGVR YDPLLVARFI ELMRHPASLG IATSVAEVQS AQLREGMQLA DDLRTHRGVL
LMTKGSVMSA HQIELVRRFE AREGTSFDIL VLTGAAASKQ APADAAPPA