Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5931 |
Symbol | |
ID | 6182178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 478969 |
End bp | 479631 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641689062 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001815921 |
Protein GI | 172065209 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.639892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAACA TCCAACTTGC CCTGCTGGCG TCCGTCGTTT CCCTCGCTGC CTGTTCGAGC GCGTCGGGGC CGACCTACAA CGCATACGAA TTGCAGTCCC GTGACGGCAT CCGCACCTTC CGCGTCGACT GTCACGGCAT CCTGTCGAGC GCGAAGACCT GCATGAAGGT CGCGACGCGC ATGTGCGCCA ACGACGCCGT GCGCGTGGTC GATACCACGA CGCCGTACCG CGACGGCGCC GATCCGCACT CGATGGTGTT CCAGTGCGGC GCGGCACCCG CGCCGGTCCC CGCGGCCGCA GCGCCCGCGC CCGCTGCGGT TGAGAAGGTG AGCCTCACCG GCGATGCCTA TTTCGCGACC GACTCGGCCG TGCTGACGTC GGCGGCCACT GCCGCGCTCG ACAAGCTGCT GAACCAGCAA GGCGACCGGC ATTTCGCGCG CGTGGAAGTG GACGGTTATA CCGACGCGAC CGGCTCGGAT GCGCACAATC AAGCGCTGTC GAAGCGTCGG GCCGATGCGG TTGCGGCGTA TCTGCGTGGA CACGGCCTGA AGGCGGATGC GTTTGCCGCG ACCGGGCATG GAGAAGCCAA TCCGGCGGCA TCGAACGATA CCGTCGAAGG GCGGGCGCGC AATCGCCGGG TGGAAATCTC GCTGCAGAAG TAA
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Protein sequence | MKNIQLALLA SVVSLAACSS ASGPTYNAYE LQSRDGIRTF RVDCHGILSS AKTCMKVATR MCANDAVRVV DTTTPYRDGA DPHSMVFQCG AAPAPVPAAA APAPAAVEKV SLTGDAYFAT DSAVLTSAAT AALDKLLNQQ GDRHFARVEV DGYTDATGSD AHNQALSKRR ADAVAAYLRG HGLKADAFAA TGHGEANPAA SNDTVEGRAR NRRVEISLQK
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