| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5905 |
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| Symbol | |
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| ID | 6182488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 446071 |
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| End bp | 447228 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689036 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001815895 |
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| Protein GI | 172065183 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.438446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.224196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCGG CGCGTGCGTG CGCGCCGCGC CGAGCGTCGC GTGTCGGTCC GCTCGTGATG
ATCCTGCCGC TGTGCACATT GCTGGGCGCG TGCGGCATCG CGCCGGGCAT GCGCATGCAG
CAGCCGGCGT CGATTCCGCT GCAAAGCGGT ACCACGCCGG CCGACAGTGC CGCGTTGCCG
GTTCCGGTCA CGAACATCGA CCTGACGCTG ATCCGGCGCA TGCGCGATAC CGAACGCGGT
ACGCGCGGCG AAGCCCGCGA TGTCGTATCG TCGCCGGACG CGTACACCAT CGGCCGCGGC
GATGTGCTGC AGATCACCGT ATGGGACCAC CCCGAGCTCG CGGCGGCGCT CGGTGCGCCG
GCGCAGGCCG CGCCACGCGC GGCGGATGCA CCGCCGGGTT TCGTCGTCGA CCAGGACGGC
ACGCTGCAGT TTCCCTATGC GGGCCGGCTG ACGGTCGCCG GACTGACGGC CGAGCAGGTG
CAGACGCAGC TCACGCGCCG TCTCGACAAG ACGTTCAGGA ATCCGCAGGT CACCGTGCGT
ATCGCGTCGT TCCGCGCGAA GCAGGTGTAT ATCGAGGGCG AGGTGCATAC GCCGGGCTCG
CAAGCCGTGA ATGACATCCC GATGACGCTG TATGACGCGA TCGGGCGGGC CGGCGGCTTT
TCGGCGGCGG CCGATCAAAG CCACATCGTG CTGGTGCGCG ACGGCGTCGA GCGCCGGATC
GACCTGACCG AGATGGCCGA GCAGGGGCGC AATCCGTCGA AGATGGTGCT GCGCAACGGC
GACCTCGTGC GTGTGCTGCC GCGCGACGAG AGCGGTGTGT TCGTGATGGG CGAGGTCAAC
AAGCCCGTGA CGGCGTTGCC GATGCGCAAT GGCCGGCTGA CGCTGAGCGA CGCGATCGCG
CAGGCCGGCA GCCTGAACGC GAACACGGCC GATGCCGCGC AGCTCTATGT GGTGCGCGGG
ATGCAGGACC AGCAGCCGCA GGTCTATCAC CTCGATGCGC GCTCGCCGGT CGCGATGGTG
CTGGCGAATC AGTTCCAGCT GAAGCCGAAG GACATCGTCT ATGTCGACGG CAACGGGCTC
GTCCGCTTCA GCCGCGTGCT CAGCCTGTTG CTGCCGGCCA TCAACGCCGG CCTGACCGCG
GCGATTGCGA CCAAATGA
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| Protein sequence | MESARACAPR RASRVGPLVM ILPLCTLLGA CGIAPGMRMQ QPASIPLQSG TTPADSAALP
VPVTNIDLTL IRRMRDTERG TRGEARDVVS SPDAYTIGRG DVLQITVWDH PELAAALGAP
AQAAPRAADA PPGFVVDQDG TLQFPYAGRL TVAGLTAEQV QTQLTRRLDK TFRNPQVTVR
IASFRAKQVY IEGEVHTPGS QAVNDIPMTL YDAIGRAGGF SAAADQSHIV LVRDGVERRI
DLTEMAEQGR NPSKMVLRNG DLVRVLPRDE SGVFVMGEVN KPVTALPMRN GRLTLSDAIA
QAGSLNANTA DAAQLYVVRG MQDQQPQVYH LDARSPVAMV LANQFQLKPK DIVYVDGNGL
VRFSRVLSLL LPAINAGLTA AIATK
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