Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5881 |
Symbol | |
ID | 6182779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 414603 |
End bp | 415283 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641689012 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001815871 |
Protein GI | 172065159 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.453374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGA AACGCCCTGC TCTTGTCTAC GCCACGCGCG CCGAAGCCGC AGCGAACGAA TTGCGCCGCC GTATCCTGAC GGGGGAGTAT GTCGACGGCT ACCAGCTTCG CCAGGATGCG CTCGCGACCG AACTCGGCAT CAGCCGCATC CCGCTGCGCG AAGCGCTCGT GCAGCTCGAG AGCGAAGGGC TCGTGAAGAT CCTGCCCCAC AAGGGCGCGA TTGTCTCGGA GCTGTCCCCG GAGGACATCA CCGAACTCTT CGAATTGCGC GCGCTGCTGG AACCCGTGCT GCTGAAAAAA TCGATTCCGA AGCTCACCGC CGAGGATTTC GCGCGGCTCG ATGCGATTCT CGCGGAGTAC AGCGAAGTGC TGCATGCGAG CCAGTCCGGA CGCTGGGGCG AACTGAACAC CGAACTGCAT CAGCTGCTGC TGTCGCGCGC CGACCAGCCG AAGACCACGG CGATCGTCGC GTCGCTGCTG CAACAGACCG ACCGTTACAC GCGCGTGCAA CTGTCTCTAT CCGAGGCCGC GCGCGACGTG GCCGAATCCG AACACGCCGA ACTCGTCGCG TTGTGCCGCA AGGGCGATGC GCGCGCGGCG GCGTCGCTGC TCAAGCGGCA CATCGAGCAT GCGGGCGGCG AGTTGAATGC GTTCCTGCGT AACCGGCGGC TGGGGCGTTG A
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Protein sequence | MNEKRPALVY ATRAEAAANE LRRRILTGEY VDGYQLRQDA LATELGISRI PLREALVQLE SEGLVKILPH KGAIVSELSP EDITELFELR ALLEPVLLKK SIPKLTAEDF ARLDAILAEY SEVLHASQSG RWGELNTELH QLLLSRADQP KTTAIVASLL QQTDRYTRVQ LSLSEAARDV AESEHAELVA LCRKGDARAA ASLLKRHIEH AGGELNAFLR NRRLGR
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