Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5843 |
Symbol | |
ID | 6182653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 374637 |
End bp | 375521 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641688978 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001815837 |
Protein GI | 172065125 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCA ACGACCTCCG GATCTTCGTG TCGACCGTCG ATGCGGGCAG CTTTACGGCG GCGGCCGATC AACTGATGCT GTCCAAGCAA TTCGTGAGCC GGCGCACGAT GGCGCTGGAG GCGTCGCTCG GCGTGCGTCT CCTGCATCGC AATACGCGCA ATCTCGCGGT CACGGAATCG GGGCAGGAGT TCTATGCGCG CGCGCAGCGG ATCCTCGCCG AGGTCGCCGA CGCCGAGCAG GCGATGTCGG TGCGCAGCAC CGAACTGCAT GGCTCGCTGA AGATCAGCGC GCCGCTGTCG TTCGGGATCA CGCACGTGTC GCCGCTGATC GCCGAATTCC TGGCCGCGCA TCCGGCCGTG CGGCTGAACC TCGACCTGAC CGACCGGCGC GTCGATCTCA TCGGCGAGGG CTTCGACCTC GTGCTGCGGA TCGGCGCGCT CGAGGATTCG ACGCTGATCG CCCGCCCGCT CGGTGCGTGG AAGATGATCG CGTGCGCGAG CCCCGCTTAC CTGAAGCGGC AGGGCACGCC CGACACGCCG GCCGATCTCG CCGCGCACAC GTGCCTGCTG TACGGCCGAG AGCGGCGCGT CGGCTGGGAA TTCCGGGTCG ACGGCGCGGC GCGCACGTTC GACGTGCAGG GGCCGCTCGT CGCGAACAAC GGCGAAGTCG TGCGCGACGC GGCGATCGCG GGGCTCGGCA TCGCGCTGCT GCCGCATTTC ATCGTCGGCG CGGCGCTCGA CAGCGGCGCG CTCGTGCCGG TGCTCGACGC GTACGCGCCT TCCCCGATCA CGCTGAACGC GGTGTTTCCG CAGCATCGGG AAGGGTTCGT CACGCTGCGC ACGTTCATCG GATTTCTGGC GGAGCGGCTG GGTATGCGGA GGTAG
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Protein sequence | MELNDLRIFV STVDAGSFTA AADQLMLSKQ FVSRRTMALE ASLGVRLLHR NTRNLAVTES GQEFYARAQR ILAEVADAEQ AMSVRSTELH GSLKISAPLS FGITHVSPLI AEFLAAHPAV RLNLDLTDRR VDLIGEGFDL VLRIGALEDS TLIARPLGAW KMIACASPAY LKRQGTPDTP ADLAAHTCLL YGRERRVGWE FRVDGAARTF DVQGPLVANN GEVVRDAAIA GLGIALLPHF IVGAALDSGA LVPVLDAYAP SPITLNAVFP QHREGFVTLR TFIGFLAERL GMRR
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