| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5837 |
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| Symbol | |
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| ID | 6182647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 369734 |
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| End bp | 370906 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641688972 |
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| Product | porin |
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| Protein accession | YP_001815831 |
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| Protein GI | 172065119 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.543767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TCCGGACATT CGCGCTGCTC GCGCTGCCCG CCTCGCTCCA TGCGGCCGGC
GCGCACGCGC AAAGCAGCGT CACGCTGTAC GGCATCGCCG ATGCGGGCAT CGCGTACGTG
CACAACGTGC GCAACGCGAA CGGCAGCAAC GCGTCGAACC TCGTCAGGTT CAGCAGCGGC
AATCTGTCCG GCAGCCGCTG GGGGCTGCGC GGCATCGAGG ATCTCGGCGG CGGGCTGTCC
GCGCTGTTCC AGCTCGAGAA CGGCTTCAAC CTCGGCACCG GCGCGCTCGG CCCGGGCGGG
CGCGAATTCG GCCGCAAGGC CGTCGTCGGC CTCGCGAACA CCACCTACGG AACCGTGACG
CTCGGCCGCC AGTACGATCC GGTCGTCGAT CTCGTGCAGG GCCTCACCGA GGACAACTAC
TTCGGCGGCG TATTCGCGAC GCCGGGCGAC CTCGACAACT ACGACAACAG CCTGCGCGTC
AGCAACGCGG TGAAATACAC GAGCCCGTTG ATCTCCGGCT TCCAGTTCGC CGCGCTGTAC
GGCTTCGGCG GCGTCGCGGG CGCGACCGGC AGCGGCCGCA CCTACAGCTT CGGCCTGAGC
TACGCGAACG GCCCGCTGTC GCTCGGCGCC GGCTACTTCT TCGCGAACGG CGGCTCGACG
GTCGCGAGCG GCGTGCGCAC GTGGTCGAGC AGTTCGGACA CGCTGTTCAA TACCGTGATC
AACCAGGGCT TCTCGAGCGC GAAGTCGATC CAGATCGTGC GCGTGGCCGG CCAGTACGTG
GCCGGGCCGG CGACCTTCGG CCTCGCGTAT TCGAACACGC AGTACGGCGC GGACACGCTG
TCGGCCTTCA CGCAGAACGC GAAGTTCAAC AACGGCTCGG CGTTCTTCAA CTGGCAGTTC
TCGCCGGCGC TGCGCGCGGG TGTCGGCTAC AACTACACGT CGCTGACGGG CCCGGCCTCC
GCGCACTACA ACCAGGTGAA CCTCGGCGCG GACTACGCGC TGTCGAAGCG CACCGACCTG
TATGCGCTGT TCGGCTACCA GAAGGCGAGC GGCAATACGC TGAACGCGAG CGGCGCGATC
GTGAAGGCCG CGGCATCGGT CGGCTCGTAT GGCGTGAACG CCGGCACCGA TACGCAGGAA
CTCGCGATCG TCGGCATTCG CCACAAGTTC TGA
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| Protein sequence | MKRIRTFALL ALPASLHAAG AHAQSSVTLY GIADAGIAYV HNVRNANGSN ASNLVRFSSG
NLSGSRWGLR GIEDLGGGLS ALFQLENGFN LGTGALGPGG REFGRKAVVG LANTTYGTVT
LGRQYDPVVD LVQGLTEDNY FGGVFATPGD LDNYDNSLRV SNAVKYTSPL ISGFQFAALY
GFGGVAGATG SGRTYSFGLS YANGPLSLGA GYFFANGGST VASGVRTWSS SSDTLFNTVI
NQGFSSAKSI QIVRVAGQYV AGPATFGLAY SNTQYGADTL SAFTQNAKFN NGSAFFNWQF
SPALRAGVGY NYTSLTGPAS AHYNQVNLGA DYALSKRTDL YALFGYQKAS GNTLNASGAI
VKAAASVGSY GVNAGTDTQE LAIVGIRHKF
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