| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5823 |
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| Symbol | |
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| ID | 6182164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 357912 |
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| End bp | 358517 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641688958 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_001815817 |
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| Protein GI | 172065105 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.960322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCAAA CCACTATCGG AAACGCGTCG CAACTGTCCG CGTCGAACCT TGCGGCACTC
GCGTCGTATC GACACGCAAT CTTCATCGAG AAGCTGGGCT GGCAGCTTCC GGTAGTCAAT
CAGCAGGAGT TCGATCAATT CGATCGGCCG GACACGATCC ATATCTTCGG TCGCGAGGAA
AGCGGCGCGA TCTGCTCGTG CGCCCGACTG CTGCCGACGA CCCGGCCGTA CCTGCTGAGC
GAGGTTTTTC CCGGGCTGAT GGGCGCGGCA CCGGTGCCGA ATGCGCCGGA TATCTGGGAA
CTCTCGCGCT TTTCGTCCTA CATCCTCGGC GCCGATTCCG GCGGCCTCAA GCGCGCGCAT
GCGAACACGC GCAGATTGCT GGCGGACGTC GTGGAATTCG CGCGCTCGAA CGGCGTTCGA
CGGCTCATCA CGGTGTCGCC GCTCGGCGTC GAACGGCTGC TGATGCGCCT GAACGTTCAC
GCGCACCGTG CCGCGCCCCC GCAGATCATC GACGGAAAGC CGGTGTTCGC GTGCTGGATC
GAGATCGATG AAATCACGTG CGCGTCGCTC GGCATCGAAT GTCCGCGCAC GCCGACCCCG
AGCTGA
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| Protein sequence | MHQTTIGNAS QLSASNLAAL ASYRHAIFIE KLGWQLPVVN QQEFDQFDRP DTIHIFGREE
SGAICSCARL LPTTRPYLLS EVFPGLMGAA PVPNAPDIWE LSRFSSYILG ADSGGLKRAH
ANTRRLLADV VEFARSNGVR RLITVSPLGV ERLLMRLNVH AHRAAPPQII DGKPVFACWI
EIDEITCASL GIECPRTPTP S
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