| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5768 |
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| Symbol | |
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| ID | 6182513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 294197 |
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| End bp | 295696 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641688904 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001815763 |
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| Protein GI | 172065051 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.20317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.984778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGC ACGGCCTGCG CCTCGCGGCG GCACTCGCGC CGCTCGCGCT CGCACTCGGC
GCGTGCAAGT CCGTCGGCCC CGATTACACG CTGCCGCAAC AGGCGTACGT GAATGCGCCG
CTCGCGAACC ATGCGCTCGA TGACGCGAAC GGCGCGCTCG TCTCGCGCAA CGCCGTGCCC
GGCAACTGGT GGCAGCTGTA CGACGATCCC GTGCTCGACG CGCTCGTGCG CAGCGCGCTG
AAATCGAACA CCGACCTGCG CGTCGCCGCG GCCAACCTCG CGCGCTCGCG TGCGGCGCTG
GAAGTCGCGA ACGAACAGGG CGGCTTCTCC GGCAGCGCGG AAGCAGCCGT GCAGCGCGCA
CAGGAATCGG CCGAGCAGTA TCTGCTCGAA AACAAACTGC CGGTCGTCAA CGAAGGCACG
GTCGGCATCA GCGTGTCGTA TGAACTCGAT CTGTTCGGCA AGCTGCGGCG CGGCGTCGAG
GCCGCGCGCG CGGATAGCGA AGCCGTGCAG GCGGCCGCCG ACCTCGCGCG CATCACGGTC
GTCGCGGACG TCGTGCGTGC GTACGTCGAA TCGTGCTCCG CCGGCGACGA GCTCGCGATC
GCGAAGCAGT CGCTCGCGCT GCAGCAGCAG CGCGTGAAGC TGTCGCAGCG GCTGCGCGAT
GCGGGGCGTG GCAACCAGAG CGACGTGACG CGCGGCGTCA CGCAGGTACG CACGCTGTCC
GCCGACATCC CGCGTTTCGA AGGTCGCCGC AAGATCGCGC AATACCAGCT CGCCGCGCTG
CTCGCGCGCT CGCCGGCCGA CCTGCCGAAG GCGGTCGCCG AATGCGAGCG CCTGCCGAAG
CTGCGCCGGC CGATTCCGAT CGGCGACGGC GCCGCGCTGC TGCGACGCCG CCCCGACGTT
CGCGAAGCCG AGCGCCAGCT CGCCGCCGCG ACCGCACGGA TCGGCGTCGC GACCGCCGCG
CTGTATCCGT CGATCAGCAT CGGCGCGTCG GCCGGCTCGG TCGGCGTCGC CGCCGACCTG
TTCTCGTCCA CCACGAACCG CTGGTCGTTC GGACCACTGA TCAGCTGGTC GTTCCCGGTC
AACGGCCAGC GCGCACGCGT GCGCGAAGCC GAAGCCGCGA CCGGCGGCGC ACTCGCGCAC
TTCGACGGCG TCGTGCTGAA CGCGCTGCGC GAAACGCAGT CGAGTCTCGC GACCTACGCG
GCCGACGTGC AGCGCACCGA TGCGTTGCGC ACGGCCTACG AATCGGCGCG CAATTCCGCT
GACGAGACGC ACCGGCTCTT TGTGGCCGGC CGCGAATCGT TCATCTCCGA TCTCGATGCG
ACGCGCACGT TGACGAGCGT GCGCGCGCAG GTCGCCGCGG CCGAAGGGCA AGTCGCCGCC
GACCAGGTGA AGCTGTTCCT CGCGCTCGGC GGCGGATGGG AAGGCGACGC GGCGCCGGCT
GTGTCGCAGC AAACGTCGGC GGCCGGTGCG CCGGCTGCTG CGTCGGCCCC GGTCAGGTAA
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| Protein sequence | MKRHGLRLAA ALAPLALALG ACKSVGPDYT LPQQAYVNAP LANHALDDAN GALVSRNAVP
GNWWQLYDDP VLDALVRSAL KSNTDLRVAA ANLARSRAAL EVANEQGGFS GSAEAAVQRA
QESAEQYLLE NKLPVVNEGT VGISVSYELD LFGKLRRGVE AARADSEAVQ AAADLARITV
VADVVRAYVE SCSAGDELAI AKQSLALQQQ RVKLSQRLRD AGRGNQSDVT RGVTQVRTLS
ADIPRFEGRR KIAQYQLAAL LARSPADLPK AVAECERLPK LRRPIPIGDG AALLRRRPDV
REAERQLAAA TARIGVATAA LYPSISIGAS AGSVGVAADL FSSTTNRWSF GPLISWSFPV
NGQRARVREA EAATGGALAH FDGVVLNALR ETQSSLATYA ADVQRTDALR TAYESARNSA
DETHRLFVAG RESFISDLDA TRTLTSVRAQ VAAAEGQVAA DQVKLFLALG GGWEGDAAPA
VSQQTSAAGA PAAASAPVR
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